Alternatives and similar repositories for HippMapp3r:

Users that are interested in HippMapp3r are comparing it to the libraries listed below

• AICONSlab / iCVMapp3r
  AICONSlab's brain extraction (skull-stripping) algorithm using CNNs
  ☆18Updated 6 months ago
• AICONSlab / HyperMapp3r
  AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs
  ☆17Updated 6 months ago
• WCHN / CTseg
  Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.
  ☆70Updated 9 months ago
• AICONSlab / MIRACL
  Multi-modal Image Registration And Connectivity anaLysis
  ☆43Updated this week
• OSIPI / DCE-DSC-MRI_CodeCollection
  TF2.3 DCE-/DSC-MRI processing code, collected, tested and made available to all.
  ☆38Updated 2 months ago
• CompImg / LST-AI
  LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation
  ☆32Updated last month
• AICONSlab / SynthSegCSVD
  CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI
  ☆13Updated 3 weeks ago
• npnl / ATLAS
  A space to log issues, updates, and software related to the ATLAS (Anatomical Tracings of Lesions After Stroke) database.
  ☆82Updated 2 years ago
• MIC-DKFZ / radtract
  RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.
  ☆11Updated 9 months ago
• JulianKlug / PerfusionCT-Net
  A UNet for the analysis of perfusion CT imaging in the setting of acute ischemic stroke.
  ☆16Updated 9 months ago
• vanandrew / brainextractor
  Brain Extraction Tool in Python
  ☆40Updated last month
• CBICA / BrainMaGe
  Brain extraction in presence of abnormalities, using single and multiple MRI modalities
  ☆34Updated last month
• bthyreau / hippodeep
  Brain Hippocampus Segmentation
  ☆33Updated 5 years ago
• Medical-Image-Analysis-Laboratory / FetalSynthSeg
  FetalSynthSeg Code
  ☆12Updated last month
• dama-lab / multi-atlas-segmentation
  Multi Atlas Segmentation and Morphometric analysis toolkit (MASMAT) for mouse brain MRI
  ☆37Updated 6 months ago
• Milan-BUAA / TSAN-brain-age-estimation
  TSAN: Two-Stage-Age-Net, for brain age estimation from T1-weighted MRI data.
  ☆66Updated last year
• pnlbwh / CNN-Diffusion-MRIBrain-Segmentation
  CNN based brain masking
  ☆16Updated last month
• SVRTK / SVRTK
  MIRTK based SVR reconstruction
  ☆50Updated 2 weeks ago
• coendevente / SlicerNNInteractive
  A 3D Slicer extension for efficient segmentation with nnInteractive.
  ☆43Updated this week
• bthyreau / hippodeep_pytorch
  quick segmentation of the hippocampus from T1 MRI images. (pytorch version)
  ☆26Updated 3 weeks ago
• SlicerDMRI / whitematteranalysis
  White matter tractography clustering and more...
  ☆74Updated 3 weeks ago
• gift-surg / NiftyMIC
  NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.
  ☆147Updated 3 years ago
• CCI-Bonn / HD-BET
  Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the …
  ☆35Updated 3 years ago
• msharrock / deepbleed
  DeepBleed: 3D Volumetric Intracranial Hemorrhage Segmentation for Clinical Trials
  ☆27Updated last year
• quqixun / BrainPrep
  Preprocessing pipeline on Brain MR Images through FSL and ANTs, including registration, skull-stripping, bias field correction, enhanceme…
  ☆203Updated 6 years ago
• MASILab / SLANTbrainSeg
  Deep Whole Brain Segmentation Using SLANT Method
  ☆118Updated last year
• MASILab / cornn_tractography
  Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
  ☆16Updated last year
• aqqush / CT_BET
  Robust Brain Extraction Tool for CT Head Images
  ☆46Updated 4 years ago
• NatLee / nipype-preprocess-on-brain-MR
  The project is used to do preprocessing on brain MR images by using Nipype.
  ☆36Updated 10 months ago
• CCI-Bonn / HD-GLIO
  Automated deep-learning based brain tumor segmentation on MRI
  ☆30Updated 2 years ago