Alternatives and similar repositories for brat-standoff-to-json

Users that are interested in brat-standoff-to-json are comparing it to the libraries listed below

• bionlp-hzau / BioNLP-Corpus
  Repository used to collect biomedical corpus on the Internet!
  ☆35Updated 4 years ago
• isegura / DDICorpus
  ☆35Updated 4 years ago
• usmaann / BioALBERT
  Benchmarking for Biomedical Natural Language Processing Tasks with a Domain Specific ALBERT
  ☆29Updated 3 years ago
• Yuanhy1997 / GenBioEL
  Generative Biomedical Entity Linking via Knowledge Base-Guided Pre-training and Synonyms-Aware Fine-tuning [NAACL 2022]
  ☆19Updated 2 years ago
• gmpoli / electramed
  ☆13Updated 2 years ago
• tigerchen52 / Biomedical-Entity-Linking
  A Keras implementation of the AAAI21 paper "a lightweight neural model for biomedical entity linking"
  ☆54Updated 2 years ago
• GanjinZero / KeBioLM
  Improving Biomedical Pretrained Language Models with Knowledge [BioNLP 2021]
  ☆65Updated 2 years ago
• L-ENA / HealthINF2020
  Code and supplementary material for the HealthINF conference paper
  ☆13Updated 4 years ago
• PlusLabNLP / GEANet-BioMed-Event-Extraction
  Code for the paper Biomedical Event Extraction with Hierarchical Knowledge Graphs
  ☆62Updated 2 years ago
• kingsaint / BioMedical-EL
  Fast and Effective Biomedical Entity Linking Using a Dual Encoder
  ☆19Updated 3 years ago
• laituan245 / rescnn_bioel
  ☆25Updated 2 years ago
• dhdhagar / arboEL
  Entity Linking & discovery solution. Agarwal et al., "Entity Linking via Explicit Mention-Mention Coreference Modeling", NAACL 2022.
  ☆27Updated last year
• vedantc6 / mtl-dts
  Implementation for "Deeper Task-Specificity Improves Joint Entity and Relation Extraction"
  ☆21Updated 2 years ago
• ujiuji1259 / biocom
  ☆10Updated 4 years ago
• heyunh2015 / diseaseBERT
  Code and dataset of EMNLP 2020 paper "Infusing Disease Knowledge into BERT for Health Question Answering, Medical Inference and Disease N…
  ☆69Updated 3 years ago
• rubenkruiper / FOBIE
  FOBIE dataset and code for Semi-Open Relation Extraction, applied to Biology for Computer-Aided Biomimetics.
  ☆35Updated 5 years ago
• udel-biotm-lab / BERT-CLRE
  ☆24Updated 4 years ago
• dongfang91 / Generate-and-Rank-ConNorm
  Generate-and-Rank Framework with Semantic Type Regularization for Biomedical Concept Normalization
  ☆25Updated 4 years ago
• spyysalo / ncbi-disease
  NCBI disease corpus - related resources
  ☆29Updated 8 years ago
• stylerw / thymedata
  This is a repository for annotation data for the THYME Project, a clinical natural language processing project dedicated to extracting us…
  ☆37Updated last month
• svjan5 / medtype
  MedType: Improving Medical Entity Linking with Semantic Type Prediction
  ☆116Updated 2 years ago
• cambridgeltl / cometa
  Corpus of Online Medical EnTities: the cometA corpus
  ☆50Updated 3 months ago
• kamalkraj / BioELECTRA
  BioELECTRA
  ☆50Updated 3 years ago
• amir-zeldes / biaffine-ner
  Named Entity Recognition as Dependency Parsing
  ☆39Updated 4 years ago
• laituan245 / bio_relex
  Joint Biomedical Entity and Relation Extraction with Knowledge-Enhanced Collective Inference
  ☆40Updated 2 years ago
• BaderLab / Biomedical-Corpora
  A collection of annotated biomedical corpora, which can be used for training supervised machine learning methods for various tasks in bio…
  ☆36Updated 6 years ago
• ciads-ut / transfer-learning-ner
  Code, datasets, and results for "Transfer Learning for Entity Recognition of Novel Classes," Rodriguez, Caldwell, and Liu (COLING, 2018).
  ☆35Updated 6 years ago
• DFKI-NLP / tacrev
  [ACL 20] TACRED Revisited: A Thorough Evaluation of the TACRED Relation Extraction Task
  ☆72Updated 5 years ago
• asahi417 / kex
  Kex is a python library for unsupervised keyword extraction from a document, providing an easy interface and benchmarks on 15 public data…
  ☆54Updated 3 years ago
• lasigeBioTM / BiOnt
  BiOnt: Deep Learning using Multiple Biomedical Ontologies for Relation Extraction
  ☆26Updated last year