arcus / DART_Community_of_Practice

Related projects ⓘ

Alternatives and complementary repositories for DART_Community_of_Practice

• Center-for-Health-Data-Science / IntroToML
  ☆10Updated 6 months ago
• Orphanet / Orphadata_aggregated
  Provided files are a partial extraction of the Orphanet knowledge base on Rare Diseases
  ☆44Updated 3 months ago
• anergictcell / pyhpo
  A Python library to work with, analyze, filter and inspect the Human Phenotype Ontology
  ☆25Updated 4 months ago
• AlexsLemonade / OpenPBTA-analysis
  The analysis repository for the Open Pediatric Brain Tumor Atlas Project
  ☆100Updated last year
• PayneLab / cptac
  Python packaging for CPTAC data
  ☆90Updated 4 months ago
• ZenBrayn / asms_2020_fall_workshop
  ☆26Updated 3 years ago
• phenopackets / phenopacket-schema
  Repository for the GA4GH phenopacket schema
  ☆78Updated last month
• broadinstitute / PANOPLY
  Repository for the Broad Institute Proteogenomic Data Analysis Center (PGDAC) established by the NIH Clinical Proteomics Tumor Analysis C…
  ☆33Updated last week
• ohsu-comp-bio / g2p-aggregator
  Associations of genomic features, drugs and diseases
  ☆48Updated last year
• evanpeikon / math_for_compbio
  This repository contains math tutorials I created for Bioinformatics and Computational Biology.
  ☆74Updated 2 months ago
• monarch-initiative / phenopacket-store
  Collections of GA4GH phenopackets that represent individuals with Mendelian diseases.
  ☆15Updated this week
• mikelkou / fava
  Functional Associations using Variational Autoencoders
  ☆38Updated this week
• broadinstitute / depmap_omics
  What you need to process the Quarterly DepMap-Omics releases from Terra
  ☆110Updated last week
• saezlab / pypath
  Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotat…
  ☆134Updated last week
• TheJacksonLaboratory / HPOworkbench
  Human Phenotype Ontology Workbench
  ☆18Updated last year
• obophenotype / cell-ontology
  An ontology of cell types
  ☆145Updated this week
• bcgsc / pori
  Platform for Oncogenomic Reporting and Interpretation (PORI)
  ☆31Updated 4 months ago
• ccf-tfehlmann / ibdplexus
  This package helps wrangle the clinical data in IBD Plexus. IBD Plexus is a data exchange platform designed to accelerate research toward…
  ☆12Updated 3 months ago
• bigbioinformatics / r-programming-and-rnaseq-workshop
  ☆25Updated 3 years ago
• TranslationManchester / bioinformatics-training-collection
  https://www.translation.manchester.ac.uk/training/
  ☆13Updated last year
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆17Updated this week
• EBISPOT / efo
  Github repo for the Experimental Factor Ontology (EFO)
  ☆56Updated this week
• TheAustinator / cellforest
  A highly interactive single-cell bioinformatics workflow management library. Built with dataforest
  ☆10Updated 2 years ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆80Updated this week
• Bioinformatics-Research-Network / skill-assessments
  Training requirements for joining projects
  ☆73Updated 3 months ago
• epigenelabs / inmoose
  InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.
  ☆54Updated this week
• obophenotype / upheno
  The Unified Phenotype Ontology (uPheno) integrates multiple phenotype ontologies into a unified cross-species phenotype ontology.
  ☆76Updated last week
• elvanov / MOGAMUN
  ☆12Updated 3 years ago
• zhangyuqing / ComBat-seq
  Batch effect adjustment based on negative binomial regression for RNA sequencing count data
  ☆163Updated 4 years ago
• bartongroup / Proteus
  R package for analysing proteomics data
  ☆48Updated last year