mphowardlab / azpluginsLinks
A HOOMD-blue component for soft matter simulations.
☆23Updated 2 months ago
Alternatives and similar repositories for azplugins
Users that are interested in azplugins are comparing it to the libraries listed below
Sorting:
- A VMD molfile plugin reader for HOOMD-blue GSD files.☆17Updated 7 months ago
- HOOMD-blue example scripts.☆35Updated last week
- A plugin that allows the use of Tensorflow in Hoomd-Blue for GPU-accelerated ML+MD☆31Updated 10 months ago
- Quickly generate, start and analyze benchmarks for molecular dynamics simulations.☆79Updated 9 months ago
- A simple Lennard-Jones molecular dynamics software☆26Updated 11 months ago
- Sample molecular simulation workflows using a MoSDeF and community tools☆14Updated 2 years ago
- MDAnalysis wrapper around Packmol☆33Updated 2 years ago
- Molecular dynamics and Monte Carlo simulation package for polymeric and molecular liquids☆34Updated 2 years ago
- An interactive structure viewer alongside its simulated diffraction pattern☆18Updated 3 months ago
- Software Suite for Advanced General Ensemble Simulations☆87Updated 2 years ago
- A generalized deep learning approach for local structure identification in molecular simulations. See https://doi.org/10.1039/C9SC02097G …☆17Updated 5 years ago
- Analyse Rotational Diffusion Tensor from MD Simulations☆19Updated 7 months ago
- Physical validation of molecular simulations☆56Updated 2 months ago
- A tiny package to compute the dynamics of stochastic and molecular simulations☆27Updated last year
- Coarse-grained molecular model of DNA (LAMMPS plugin)☆17Updated 3 years ago
- helPME: an efficient library for particle mesh Ewald☆29Updated 3 years ago
- Calculate position-dependent diffusivity functions from trajectory data (usually from molecular dynamics). The approach is described in h…☆11Updated 3 months ago
- Enhanced sampling methods for molecular dynamics simulations☆37Updated 2 years ago
- A package for managing pair-potential derivation using MultiState Iterative Boltzmann Inversion (MS-IBI)☆13Updated this week
- Generate coarse-grained molecular dynamics models from atomistic trajectories.☆64Updated 2 years ago
- A Python toolkit for the analyis of lipid membrane simulations☆30Updated 3 weeks ago
- Massively parallel hybrid particle-field molecular dynamics in Python.☆27Updated 9 months ago
- Main code repository for FATSLiM☆21Updated 3 years ago
- Reads Gromacs EDR file to populate a pandas dataframe☆33Updated 7 months ago
- Spectral Gap Optimization of Parameters☆18Updated 5 years ago
- A set of tutorials to introduce new users to the MoSDeF (Molecular Simulation Design Framework) toolkit☆26Updated last year
- OpenMM plugin to define forces with neural networks☆32Updated 5 years ago
- Automatic detection of equilibrated regions of molecular simulations☆17Updated 8 years ago
- TUPÃ: Electric field analyses for molecular simulations☆21Updated 3 weeks ago
- Tinker-HP: High-Performance Massively Parallel Evolution of Tinker on CPUs & GPUs☆92Updated 8 months ago