aniketkt / CTSegNetLinks
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
☆28Updated 4 years ago
Alternatives and similar repositories for CTSegNet
Users that are interested in CTSegNet are comparing it to the libraries listed below
Sorting:
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆36Updated last year
- Simulation of X-ray projections on GPU: benchmarking gVirtualXray with clinically realistic phantoms☆23Updated 2 years ago
- The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks☆61Updated 3 months ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆115Updated last month
- TOmographic MOdel-BAsed Reconstruction (ToMoBAR) software☆53Updated this week
- An open-source application for the analysis and visualization of segmented vasculature datasets☆128Updated last year
- Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing☆129Updated last month
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆67Updated 6 months ago
- 3D Image Skeletonization Tools☆37Updated 2 years ago
- ☆15Updated 6 years ago
- Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration☆23Updated 5 years ago
- Source code for 4D model-based iterative reconstruction of tomographic data☆15Updated 7 years ago
- Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)☆50Updated 11 months ago
- Data processing algorithms for tomography: https://algotom.readthedocs.io☆62Updated 3 months ago
- Jerman's tubular (vessel) and spherical (blob) enhancement filters☆75Updated 7 years ago
- Fill holes in binary 2D & 3D images fast.☆29Updated 4 months ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆53Updated last year
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆67Updated last month
- Automated quantification of fibrous networks☆12Updated 11 months ago
- Implementation of our MICCAI and invited IJCARS paper on detecting anatomical landmarks of the pelvis in X-ray images from arbitrary view…☆17Updated 6 years ago
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆49Updated 3 years ago
- A GAN based framework for artifacts and noise removal☆36Updated 4 years ago
- DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration☆46Updated 6 years ago
- Vascular Tree Synthesis Software. You will need CMake and ITK to run VascuSynth. Read the paper in the Insight Journal for instructions…☆12Updated 8 years ago
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆33Updated last year
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆78Updated 3 years ago
- ☆52Updated 7 months ago
- Repository for Vesselness algorithms☆51Updated 3 months ago
- 2D image registration in python, using napari.☆16Updated 4 years ago
- Official SuperElastix repository☆88Updated 6 years ago