aniketkt / CTSegNetLinks
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
☆27Updated 4 years ago
Alternatives and similar repositories for CTSegNet
Users that are interested in CTSegNet are comparing it to the libraries listed below
Sorting:
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆35Updated last year
- An open-source application for the analysis and visualization of segmented vasculature datasets☆123Updated last year
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆78Updated 3 years ago
- Automated quantification of fibrous networks☆12Updated 9 months ago
- Fill holes in binary 2D & 3D images fast.☆28Updated 2 months ago
- The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks☆60Updated 3 weeks ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆113Updated this week
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆33Updated last year
- A collection of tools for manipulation of morphological features in patient-specific geometries☆32Updated last year
- Bone segmentation in CT scans using Deep Convolutional Neural Networks☆31Updated 8 years ago
- ☆36Updated 3 years ago
- Extension for 3D Slicer that allows the application to be used from Jupyter notebook☆257Updated last year
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆180Updated last week
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆49Updated 3 years ago
- 3D Image Skeletonization Tools☆37Updated 2 years ago
- Simulation of X-ray projections on GPU: benchmarking gVirtualXray with clinically realistic phantoms☆22Updated 2 years ago
- Utilities for reading and writing files created by 3D Slicer☆41Updated 9 months ago
- Vascular Tree Synthesis Software. You will need CMake and ITK to run VascuSynth. Read the paper in the Insight Journal for instructions…☆12Updated 7 years ago
- Jerman's tubular (vessel) and spherical (blob) enhancement filters☆71Updated 6 years ago
- A GAN based framework for artifacts and noise removal☆36Updated 4 years ago
- A package for all projects of Medical Image processing at Vanderbilt (papers are in google drive)☆23Updated 7 years ago
- Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing☆127Updated 10 months ago
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆66Updated 4 months ago
- Repository for Vesselness algorithms☆48Updated 3 weeks ago
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆65Updated 3 weeks ago
- Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)☆50Updated 8 months ago
- The Biomedical Image Segmentation App is a free and open-source application for segmenting 3D images such as CT and MRI scans, developed …☆56Updated last week
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆52Updated last year
- ☆50Updated 4 months ago
- Official SuperElastix repository☆88Updated 6 years ago