aniketkt / CTSegNetLinks
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
☆27Updated 4 years ago
Alternatives and similar repositories for CTSegNet
Users that are interested in CTSegNet are comparing it to the libraries listed below
Sorting:
- Source code for 4D model-based iterative reconstruction of tomographic data☆15Updated 7 years ago
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆34Updated last year
- Create volumetric mesh from segmentation using Cleaver2 or TetGen☆33Updated last year
- The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks☆60Updated last week
- Software to generate 2D/3D/4D analytical phantoms and their Radon transforms (parallel beam) for image processing☆127Updated 9 months ago
- Fill holes in binary 2D & 3D images fast.☆28Updated last month
- Automated quantification of fibrous networks☆12Updated 8 months ago
- Level set segmentation with machine learning based velocity field☆42Updated 5 years ago
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆65Updated 3 weeks ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆123Updated last year
- Jerman's tubular (vessel) and spherical (blob) enhancement filters☆70Updated 6 years ago
- TOmographic MOdel-BAsed Reconstruction (ToMoBAR) software☆52Updated last week
- Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)☆174Updated last week
- A collection of tools for manipulation of morphological features in patient-specific geometries☆32Updated last year
- 3D Image Skeletonization Tools☆37Updated 2 years ago
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆66Updated 3 months ago
- Super Resolution 4D Flow MRI using Residual Neural Network☆50Updated 2 years ago
- A package for all projects of Medical Image processing at Vanderbilt (papers are in google drive)☆23Updated 7 years ago
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆112Updated this week
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆78Updated 3 years ago
- This package performs 3D non-rigid image registration for medical and synthetic images using truncated hierarchical B-splines (THB-Spline…☆21Updated 3 years ago
- Official implementation of mesh neural networks for SE(3)-equivariant hemodynamics estimation on the artery wall☆55Updated 2 months ago
- Extension for 3D Slicer that allows the application to be used from Jupyter notebook☆256Updated last year
- NumPy and Tensorflow implementation of the Multidimensional Contrast Limited Adaptive Histogram Equalization (MCLAHE) procedure☆49Updated 3 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆52Updated last year
- Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)☆50Updated 8 months ago
- Data processing algorithms for tomography: https://algotom.readthedocs.io☆61Updated 2 weeks ago
- Interactive registration tool for 3D medical datasets☆33Updated last year
- The Biomedical Image Segmentation App is a free and open-source application for segmenting 3D images such as CT and MRI scans, developed …☆54Updated last month
- 2D image registration in python, using napari.☆16Updated 3 years ago