aniketkt / CTSegNetLinks
CTSegNet is an end-to-end 3D segmentation package for large X-ray tomographic datasets using 2D fully convolutional neural networks (fCNN).
☆27Updated 4 years ago
Alternatives and similar repositories for CTSegNet
Users that are interested in CTSegNet are comparing it to the libraries listed below
Sorting:
- Python TEASAR Skeletonization for Sparse Labels☆9Updated last year
- An open-source, free comprehensive software that will allow biomedical scientists to precisely locate shape changes in their imaging stud…☆60Updated 3 weeks ago
- Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration☆24Updated 4 years ago
- A collection of tools for manipulation of morphological features in patient-specific geometries☆32Updated 8 months ago
- An extension of 3D Slicer using the Segment Anything Model (SAM) to aid the segmentation of 3D data from tomography or other imaging tech…☆64Updated 11 months ago
- 3D Slicer extension which contains a Segment Editor Effect that solidifies and extracts the surface of a segmentation☆32Updated last year
- Level set segmentation with machine learning based velocity field☆42Updated 5 years ago
- Automated quantification of fibrous networks☆12Updated 3 months ago
- Utilities for reading and writing files created by 3D Slicer☆39Updated 4 months ago
- Simulation of X-ray projections on GPU: benchmarking gVirtualXray with clinically realistic phantoms☆17Updated 2 years ago
- An image analysis workflow for open and reproducible research on femoral knee cartilage☆33Updated 11 months ago
- ☆44Updated last year
- TOmographic MOdel-BAsed Reconstruction (ToMoBAR) software☆52Updated this week
- 3D Slicer Module for connecting to model repository and use models for image analysis.☆26Updated last year
- Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python☆75Updated 2 years ago
- ☆34Updated 5 years ago
- The set of CPU/GPU optimised regularisation modules for iterative image reconstruction and other image processing tasks☆56Updated 6 months ago
- Image processing in python for 3d image stacks☆21Updated last month
- a framework for Medical Image Segmentation and Filtering☆10Updated 8 years ago
- Numerical techniques for ring artifact removal in tomography https://sarepy.readthedocs.io/☆52Updated 3 months ago
- An open-source application for the analysis and visualization of segmented vasculature datasets☆114Updated last year
- Extension to import microCT data and conduct 3D morphometrics in Slicer☆104Updated 2 weeks ago
- Simple scripts to reconstruct 3D objects from images based on Chan-Vese Segmentation and Marching Cube algorithm.☆11Updated 10 months ago
- Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)☆50Updated 3 months ago
- A software to edit, model and mesh vascular networks from centerlines.☆22Updated last year
- The cardiovascular repository contains C++ and Python programs useful for cardiovascular applications, in particular applications related…☆15Updated 9 months ago
- 2D image registration in python, using napari.☆16Updated 3 years ago
- tomography reconstruction on GPU☆23Updated 6 months ago
- Sources for imaging related tools☆20Updated last week
- C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.☆43Updated 7 years ago