Center-of-Imaging-Biomarker-Development / chp_segLinks
Segmentation tool for the delineation and volumetric quantification of the choroid plexus
☆19Updated 2 months ago
Alternatives and similar repositories for chp_seg
Users that are interested in chp_seg are comparing it to the libraries listed below
Sorting:
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆16Updated 2 years ago
- SPM implementation of https://github.com/JosePMarques/MP2RAGE-related-scripts☆11Updated last year
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆28Updated last year
- perivascular space segmentation☆16Updated 2 years ago
- Bash script to compute DTI-ALPS☆58Updated last month
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated 3 weeks ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆14Updated 6 years ago
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆16Updated 2 months ago
- BOLD-CSF coupling☆13Updated last year
- Peak width of Skeletonized Mean Diffusivity (PSMD)☆12Updated last month
- ☆10Updated 10 months ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆25Updated last year
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆73Updated last week
- A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data☆63Updated this week
- Computational Anatomy Toolbox for SPM12 or SPM25☆36Updated last week
- Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries☆41Updated 3 years ago
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆70Updated last week
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆32Updated 9 months ago
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆52Updated last year
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆18Updated 4 months ago
- Scripts to prepare MP2RAGE for Freesurfer☆28Updated last year
- ☆36Updated last month
- A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://ww…☆29Updated 3 months ago
- ☆11Updated 2 years ago
- MP2RAGE Scripts - T1 map correction & Background noise removal☆61Updated 2 years ago
- Automated Fiber Quantification☆77Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆66Updated this week
- Preprocessing of arterial spin labeling (ASL) data☆50Updated last week
- WM tract atlases for the human (HCP and UK Biobank) and Macaque brain and connectivity blueprint atlases for the human (HCP) and macaque …☆16Updated 3 years ago
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆14Updated 10 months ago