Alternatives and similar repositories for tyto:

Users that are interested in tyto are comparing it to the libraries listed below

• sbmlteam / python-libsbml
  Standalone Python package containing libSBML with support for SBML Level 3 Core and accepted SBML Level 3 packages.
  ☆22Updated 5 months ago
• matthiaskoenig / cy3sbml
  cy3sbml: SBML for Cytoscape 3
  ☆14Updated last week
• microbiomedata / nmdc-schema
  National Microbiome Data Collaborative (NMDC) unified data model
  ☆30Updated this week
• gyorilab / pybiopax
  PyBioPAX: A python implementation of the BioPAX object model
  ☆24Updated 10 months ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆37Updated last year
• sbmlteam / moccasin
  MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.
  ☆12Updated 7 months ago
• sys-bio / antimony
  ☆18Updated this week
• OBF / FALDO
  Feature Annotation Location Description Ontology
  ☆34Updated 5 years ago
• SynBioDex / libSBOL
  C++ implementation of SBOL 2.3.2
  ☆16Updated 4 years ago
• obophenotype / ncbitaxon
  Build for NCBITaxon
  ☆27Updated last week
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆39Updated last week
• evidenceontology / evidenceontology
  Evidence & Conclusion Ontology development site: Use ISSUES to request terms. See WIKI for how to request terms. See README for how to c…
  ☆50Updated 8 months ago
• OBOFoundry / OBO-Dashboard
  Summary Dashboard for Open Biological and Biomedical Ontologies
  ☆21Updated 3 months ago
• LoLab-MSM / pyvipr
  Jupyter widget for the dynamic and static visualizations of systems biology models written in PySB, BNGL, and SBML
  ☆27Updated 2 years ago
• elixir-europe / BioHackathon
  Repository with information about the BioHackathon hosted in Paris in Nov 2018
  ☆28Updated 3 years ago
• ISA-tools / isa-api
  ISA tools API
  ☆43Updated 2 weeks ago
• OBOFoundry / COB
  An experimental ontology containing key terms from Open Biological and Biomedical Ontologies (OBO)
  ☆40Updated last month
• obophenotype / provisional_cell_ontology
  Draft cell type definitions from data - candidates for inclusion in CL
  ☆12Updated 2 months ago
• PROconsortium / PRoteinOntology
  ☆14Updated 2 months ago
• biosimulations / biosimulations
  A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results
  ☆41Updated last week
• NCATSTranslator / TranslatorEngineering
  ☆10Updated last month
• RTXteam / RTX
  Software repo for Team Expander Agent (Oregon State U., Institute for Systems Biology, and Penn State U.)
  ☆33Updated this week
• edamontology / edamontology
  EDAM is a domain ontology of data analysis and data management in bio- and other sciences, and science-based applications. It comprises c…
  ☆122Updated this week
• fastobo / fastobo-py
  Faultless AST for Open Biomedical Ontologies in Python.
  ☆28Updated this week
• chemkg / chemrof
  Schema for chemistry ontology classes
  ☆17Updated 8 months ago
• sbgn / libsbgn
  Libraries for the Systems Biology Graphical Notation (SBGN); Java and C++
  ☆15Updated 5 months ago
• matthiaskoenig / dfba
  Encoding Dynamic Flux Balance Analysis in SBML
  ☆11Updated 4 years ago
• monarch-initiative / talisman
  LLM-based gene function enrichment tool
  ☆10Updated last month
• OBOFoundry / purl.obolibrary.org
  A system for managing OBO PURLs
  ☆79Updated this week
• Bioprotocols / labop
  Laboratory Open Protocol (LabOP) Language
  ☆41Updated 5 months ago