Alternatives and similar repositories for multiscaleEM:

Users that are interested in multiscaleEM are comparing it to the libraries listed below

• ShanechiLab / DynamicStimulation
  ☆18Updated 3 years ago
• egokcen / DLAG
  A dimensionality reduction framework for disentangling the flow of signals between populations of neurons
  ☆26Updated 2 years ago
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆39Updated 3 months ago
• ShanechiLab / PyPSID
  Preferential Subspace Identification Algorithm
  ☆50Updated 2 months ago
• ahwillia / tensortools
  A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA
  ☆33Updated last year
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆43Updated 5 years ago
• ShanechiLab / PSID
  Preferential Subspace Identification Algorithm
  ☆47Updated 11 months ago
• SaberaTalukder / Chen_Institute_DataSAI_for_Neuroscience
  ☆29Updated 2 years ago
• flatironinstitute / spikeforest2
  SpikeForest -- spike sorting analysis for website -- version 2
  ☆34Updated 2 years ago
• EricKenjiLee / WaveMAP_Paper
  This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linea…
  ☆21Updated last year
• spiketools / spiketools
  Tools for analyzing spiking data from single-neuron recodings.
  ☆24Updated last month
• flatironinstitute / mountainlab-js
  MountainLab is data processing, sharing and visualization software for scientists. It is built around MountainSort, spike sorting softwar…
  ☆43Updated 5 years ago
• pillowlab / GLMspiketools
  Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).
  ☆38Updated 5 years ago
• Arsha89 / AGC_Analysis
  Extracting neuronal functional network dynamics via adaptive Granger causality analysis
  ☆19Updated 6 years ago
• Eden-Kramer-Lab / replay_trajectory_classification
  State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data
  ☆46Updated 3 months ago
• sandervanbree / braintime
  Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive pro…
  ☆40Updated 2 years ago
• murthylab / GLMHMM
  ☆21Updated 5 years ago
• int-brain-lab / spikes_localization_registration
  Spike Sorting Utilities
  ☆9Updated 2 years ago
• ShanechiLab / torchDFINE
  ☆28Updated 10 months ago
• pillowlab / GLMspiketraintutorial_python
  ☆46Updated 2 years ago
• pillowlab / LNPfitting
  Linear-Nonlinear-Poisson (LNP) model fitting via Maximally-Informative-Dimensions (MID) / maximum likelihood
  ☆19Updated 7 years ago
• slinderman / ml4nd
  Machine Learning Methods for Neural Data Analysis
  ☆13Updated 5 months ago
• BeNeuroLab / 2022-preserved-dynamics
  2023: Preserved neural dynamics across animals performing similar behaviour
  ☆10Updated 3 months ago
• Mark-Kramer / Case-Studies-Kramer-Eden
  Code and data for the book "Case Studies in Neural Data Analysis"
  ☆35Updated 7 years ago
• kwikteam / klusta
  Automatic spike sorting up to 64 channels
  ☆53Updated 3 years ago
• jniediek / combinato
  Automatic spike sorting, cluster visualization, spike sorting GUIs
  ☆43Updated last year
• pillowlab / BinaryPursuitSpikeSorting
  Detect synchronous and overlapped spikes in extracellular recordings using Binary Pursuit (Pillow et al 2013)
  ☆13Updated 10 years ago
• egokcen / mDLAG
  A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…
  ☆13Updated last year
• mhhennig / HS2
  Software for high density electrophysiology
  ☆26Updated 2 months ago
• snel-repo / autolfads-tf2
  A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.
  ☆19Updated last year