ShanechiLab / PyPSIDLinks
Preferential Subspace Identification Algorithm
☆54Updated 4 months ago
Alternatives and similar repositories for PyPSID
Users that are interested in PyPSID are comparing it to the libraries listed below
Sorting:
- A dimensionality reduction framework for disentangling the flow of signals between populations of neurons☆33Updated 2 months ago
- Preferential Subspace Identification Algorithm☆54Updated last year
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆55Updated 7 months ago
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…☆88Updated 2 months ago
- Sparse Component Analysis: An unsupervised method for recovering interpretable latent factors☆28Updated 8 months ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆54Updated 4 years ago
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆51Updated 2 years ago
- ☆31Updated last year
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆15Updated 6 months ago
- jPCA for Neural Data Analysis in Python☆50Updated 2 years ago
- ☆55Updated 3 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆50Updated last month
- Phase-Amplitude Coupling under Python☆113Updated last year
- A Guide to Reconstructing Dynamical Systems from Neural Measurements Using Recurrent Neural Networks☆38Updated last year
- Methods for studying dynamic functional brain activity in neuroimaging data.☆75Updated 2 weeks ago
- Tools for analyzing spiking data from single-neuron recodings.☆29Updated last week
- ☆26Updated last week
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆39Updated 2 years ago
- Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data☆133Updated last week
- ☆59Updated 3 years ago
- Framework for Information Theoretical analysis of Electrophysiological data and Statistics☆92Updated 5 months ago
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆24Updated last week
- Phase-amplitude coupling (PAC) toolbox☆102Updated 4 years ago
- Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…☆85Updated 2 months ago
- Brain Time Toolbox: Warp electrophysiological data from clock time to brain time and analyze the dynamic neural patterns of cognitive pro…☆41Updated 3 years ago
- A PyTorch implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆117Updated 8 months ago
- A TensorFlow 2.0 implementation of Latent Factor Analysis via Dynamical Systems (LFADS) and AutoLFADS.☆22Updated 2 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Updated 6 years ago
- Cycle-by-cycle analysis of neural oscillations.☆90Updated last week
- Code for simulating neural time series, spectrogram parameterization (using SPRiNT), and generating figures from the SPRiNT preprint☆43Updated 2 years ago