timkimd / plndeLinks
Code for "Inferring Latent Dynamics Underlying Neural Population Activity via Neural Differential Equations"
☆13Updated 4 years ago
Alternatives and similar repositories for plnde
Users that are interested in plnde are comparing it to the libraries listed below
Sorting:
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆68Updated 2 years ago
- Code for Galgali et al, 2023☆13Updated 2 years ago
- Analysis of hippocampal activity in the towers task☆20Updated 4 years ago
- Exercises and examples for the latent dynamics workshop☆19Updated 2 months ago
- ☆30Updated 3 years ago
- ☆23Updated 2 years ago
- ☆26Updated 3 months ago
- Machine Learning Methods for Neural Data Analysis☆19Updated 4 months ago
- Fitting low-rank RNNs to neural trajectories (LINT method).☆18Updated 6 months ago
- Preferential Subspace Identification Algorithm☆54Updated 3 months ago
- Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-i…☆83Updated last month
- Code accompanying Inferring stochastic low-rank RNNs from neural data. @matthijspals☆24Updated 5 months ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆49Updated this week
- Supplementary code for the paper "Linking connectivity, dynamics and computations in low-rank recurrent neural networks" by F. Mastrogius…☆35Updated 7 years ago
- A package to train neural networks to perform various motor tasks☆68Updated 2 weeks ago
- Notebooks from the workshop tutorial implementing and discussing a range of generative models commonly used in neuroscience.☆38Updated 2 years ago
- Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)☆54Updated 4 years ago
- FixedPointFinder: A Tensorflow toolbox for identifying and characterizing fixed points in recurrent neural networks☆100Updated last year
- ☆58Updated 3 years ago
- Dynamical Similarity Analysis code accompanying the paper "Beyond Geometry: comparing the temporal structure of computation in neural cir…☆66Updated 3 weeks ago
- A dimensionality reduction framework for characterizing the multi-dimensional, concurrent flow of signals across multiple neuronal popula…☆16Updated 5 months ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆39Updated last year
- NeuroTask: A Benchmark Dataset for Multi-Task Neural Analysis☆12Updated 5 months ago
- A Guide to Reconstructing Dynamical Systems from Neural Measurements Using Recurrent Neural Networks☆38Updated last year
- Package for the data-driven representation of non-linear dynamics over manifolds based on a statistical distribution of local phase portr…☆85Updated last month
- STATS320: Statistical Methods for Neural Data Analysis☆198Updated 3 months ago
- This repository contains code for (1) generating example neural responses from an Izhikevich model, and (2) fitting a GLM to neural respo…☆13Updated 2 years ago
- Demixed Shared Component Analysis☆13Updated 4 years ago
- Pytorch implementation of LFADS for demo at CAN workshop☆19Updated 5 years ago
- Preferential Subspace Identification Algorithm☆54Updated last year