Gromacs tutorial PPTs and mdp files, also some plotting scripts
☆51Nov 9, 2025Updated 4 months ago
Alternatives and similar repositories for gromacs-tutorials
Users that are interested in gromacs-tutorials are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Rosetta翻译☆29Dec 7, 2022Updated 3 years ago
- Scripts used for Mulligan et al. (2020): Computationally-designed peptide macrocycle inhibitors of New Delhi metallo-beta-lactamase 1☆19Aug 20, 2021Updated 4 years ago
- ☆18Jul 22, 2025Updated 8 months ago
- Merging, linking and placing compounds by stitching bound compounds together like a reanimated corpse☆12Feb 22, 2024Updated 2 years ago
- Script to check required packages for Schrödinger suite on Linux machine☆13Mar 19, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- An Integrated VMD Graphical User Interface for Molecular Packing☆32Dec 28, 2024Updated last year
- A program analyzing 3D protein structures from PDB to generate 2D binding motifs☆16Jul 18, 2021Updated 4 years ago
- Clash文献出版社直接代理规则☆15May 5, 2025Updated 10 months ago
- ☆21Feb 14, 2025Updated last year
- EXPRORER: Rational cosolvents set construction method for cosolvent molecular dynamics (CMD) with large-scale computation☆11Jul 28, 2022Updated 3 years ago
- ☆23Jul 8, 2025Updated 8 months ago
- Efficient Sampling of PROTAC-Induced Ternary Complexes☆12Jun 3, 2025Updated 9 months ago
- Genetic algorithm to convert 3D-RISM solvent densities to explicit water molecules in binding pockets☆13Dec 19, 2017Updated 8 years ago
- McDock: Simple Monte Carlo docking algorithm in C++☆11Feb 10, 2017Updated 9 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- ☆12Jul 31, 2020Updated 5 years ago
- JSON 生成器☆29Mar 30, 2022Updated 3 years ago
- Official implementation of SketchMol.☆32Feb 14, 2025Updated last year
- 一个基于TrendRader集成版的热点新闻聚合工具,支持 三种推送模式和关键字过滤功能。☆31Nov 17, 2025Updated 4 months ago
- Predicting glycan structure from LC-MS/MS data☆34Jan 23, 2026Updated 2 months ago
- A package to create, visualize, and analysis PDB-derived pseudo-ensembles.☆10Jan 7, 2026Updated 2 months ago
- ☆13Mar 26, 2024Updated 2 years ago
- An extended variant of idock which was originally developed by @HongjianLi.☆10Mar 21, 2022Updated 4 years ago
- Fragment Linker Prediction Using Deep Encoder-Decoder Network for PROTAC Drug Design☆12Oct 2, 2023Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆11Apr 11, 2023Updated 2 years ago
- Funnel maker is a set of scripts that sets up funnel metadynamics simulations for protein-ligand binding with PLUMED and OpenMM.☆15Jan 3, 2026Updated 2 months ago
- ☆15Aug 26, 2024Updated last year
- The official implementation of the paper "MotifRetro: Exploring the Combinability-Consistency Trade-offs in retrosynthesis via Dynamic Mo…☆11Jun 25, 2023Updated 2 years ago
- This repository gathers the SchNet4AIM code along with some instructions and readme files.☆15Mar 13, 2024Updated 2 years ago
- Official implementation of DrugGEN in PyTorch☆12Oct 27, 2023Updated 2 years ago
- MolKGNN is a deep learning model for predicting biological activity or molecular properties. It features in 1. SE(3)-invariance 2. confor…☆14Jan 22, 2024Updated 2 years ago
- MDplot: Visualise Molecular Dynamics☆30Mar 23, 2022Updated 4 years ago
- Knowledge-Guided Diffusion Model for 3D Ligand-Pharmacophore Mapping☆47Jan 28, 2026Updated last month
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Traditional Chinese Medicine Network Pharmacology☆43Oct 22, 2025Updated 5 months ago
- Physico-chemical and biological property prediction for small molecules☆12May 3, 2022Updated 3 years ago
- Custom notebook extension that utilizes a new domain specific language, Chemical Markdown Language (CMDL), to assist in documentation of …☆16Sep 17, 2025Updated 6 months ago
- ☆16Dec 24, 2016Updated 9 years ago
- Plotting graphs from XVGs generated by GROMACS in Python☆32Dec 16, 2025Updated 3 months ago
- Pocket-Oriented Elaboration of Molecules: application to CDK8 inhibition☆14Dec 30, 2022Updated 3 years ago
- docking visualization with py3dmol and streamlit☆25Mar 15, 2021Updated 5 years ago