Alternatives and similar repositories for neurocontainers:

Users that are interested in neurocontainers are comparing it to the libraries listed below

• NeuroDesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆43Updated this week
• nipy / nitransforms
  a standalone fork of nipy/nibabel#656
  ☆29Updated last month
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆91Updated last week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆42Updated 3 months ago
• brainlife / ezbids
  A web service for semi-automated conversion of raw imaging data to BIDS
  ☆29Updated 2 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆65Updated last year
• NeuroDesk / neurocommand
  A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging
  ☆39Updated this week
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆59Updated last month
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆54Updated last year
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆70Updated 2 months ago
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆62Updated this week
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆22Updated this week
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆75Updated 3 years ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆34Updated last week
• neurabenn / precon_all
  precon_all surface pipline
  ☆20Updated 11 months ago
• PRIME-RE / RheMAP
  Non-linear warps between common rhesus macaque brain templates
  ☆25Updated last year
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆75Updated 10 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆41Updated 9 months ago
• nipreps / nibabies
  fMRIPrep-Infants - A robust, transparent workflow tailored for neonate and infant MRI
  ☆27Updated 2 weeks ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 8 months ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆54Updated 4 months ago
• khanlab / hippunfold
  BIDS App for Hippunfold (automated hippocampal unfolding and subfield segmentation)
  ☆54Updated this week
• QSMxT / QSMxT
  QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.
  ☆41Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆146Updated this week
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/e…
  ☆38Updated 2 weeks ago
• cmig-research-group / cmig_tools_deprecated
  Public repository of cmig_tools including FEMA
  ☆24Updated 3 months ago
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆22Updated 7 months ago
• ohbm / OpenScienceRoom2019
  Schedule and resources from the OHBM Open Science Room: Rome 2019
  ☆16Updated 5 years ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆137Updated this week
• ecr05 / MSM_HOCR
  Multimodal Surface Matching with Higher order Clique Reduction: Mac OS and Linux binaries
  ☆37Updated 2 years ago