Alternatives and similar repositories for JUNE

Users that are interested in JUNE are comparing it to the libraries listed below

• epidemics / COVIDNPIs
  Data and code for COVID-19 NPI effectiveness estimation.
  ☆30Updated 4 years ago
• bob-carpenter / stan-getting-started
  A quarto notebook introducing Stan in Python (and maybe R).
  ☆33Updated 2 years ago
• synthpops / synthpops
  Create synthetic populations for COVID-19 epidemic analyses.
  ☆48Updated 7 months ago
• tpoisot / ScientificComputingForTheRestOfUs
  Introduction to Scientific Computing 🦊
  ☆124Updated last year
• EMOD-Hub / EMOD
  Source files for building the IDM EMOD disease transmission model.
  ☆103Updated this week
• openmodelingfoundation / openmodelingfoundation.github.io
  Website for standards and governance of the Open Modeling Foundation
  ☆52Updated last month
• jkbren / networkx-edge-bundling
  hacky way to bundle some edges in networkx and matplotlib
  ☆20Updated 5 years ago
• elizavetasemenova / prob-epi
  Course materials of "Bayesian Modelling and Probabilistic Programming with Numpyro, and Deep Generative Surrogates for Epidemiology"
  ☆70Updated 7 months ago
• PublicHealthDynamicsLab / FRED
  The Public FRED Repository
  ☆78Updated last year
• joelmiller / DynamicProcessesOnNetworks
  ☆36Updated 5 years ago
• SoftMatterGroupCambridge / pyross
  PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross
  ☆168Updated last year
• bccp / covid-19-data
  collecting and organizing epidemiological covid-19 data
  ☆11Updated 4 years ago
• NetLogo / Mathematica-Link
  allows Mathematica to control NetLogo (and not vice versa)
  ☆16Updated last month
• pysal / spvcm
  multilevel spatially-correlated variance components models
  ☆18Updated last year
• MrinankSharma / COVID19NPISecondWave
  ☆15Updated 4 years ago
• tjhladish / EpiFire
  A fast C++ API for simulating the spread of epidemics on contact networks.
  ☆41Updated last year
• Circuitscape / Circuitscape.jl
  Algorithms from circuit theory to predict connectivity in heterogeneous landscapes
  ☆138Updated 3 weeks ago
• adamhaber / pybrms
  Pythonic interface to R's brms
  ☆45Updated 3 years ago
• flatironinstitute / bayes-kit
  Bayesian inference and posterior analysis for Python
  ☆46Updated last year
• epistorm / epydemix
  epydemix, the ABC of epidemics
  ☆44Updated last week
• jofmi / agentpy_workshop
  Interactive notebooks with tutorials for the agentpy package.
  ☆15Updated 3 years ago
• xorJane / Introduction_to_Julia_tutorials
  These are the jupyter notebooks used for intro tutorials to teach Julia
  ☆71Updated 6 years ago
• cmmid / covid-uk
  Scenario analyses for COVID-19 outbreak in the United Kingdom
  ☆66Updated 5 years ago
• elanmart / rust-pgbart
  ☆18Updated 2 years ago
• ukhsa-collaboration / pygom
  ODE modelling in Python
  ☆30Updated 2 months ago
• martiningram / mcmc_runtime_comparison
  Compares Stan, PyMC, and PyMC + JAX numpyro sampler on a model for tennis
  ☆33Updated 2 years ago
• InPhyT / COVID19-Italy-Integrated-Surveillance-Data
  COVID-19 integrated surveillance data provided by the Italian Institute of Health and processed via UnrollingAverages.jl to deconvolve th…
  ☆31Updated 2 weeks ago
• nickeubank / JuliaOverview
  Beamer presentation introducing Julia
  ☆13Updated 7 years ago
• IBM / yaps
  A surface language for programming Stan models using python syntax
  ☆45Updated 6 years ago
• dlsun / symbulate
  A symbolic algebra for specifying simulations.
  ☆36Updated last year