Alternatives and similar repositories for covid-19-data

Users that are interested in covid-19-data are comparing it to the libraries listed below

• aakhmetz / COVID19IncubationPeriod
  Study on estimating incubation period distribution and other epidemiological parameters for a novel coronavirus disease (COVID-19)
  ☆14Updated 5 years ago
• mrc-ide / COVID19_CFR_submission
  Repository for all scripts required to replicate the CFR analysis for paper submission.
  ☆71Updated 4 years ago
• epiforecasts / socialmixr
  R package for deriving social mixing matrices from survey data.
  ☆42Updated this week
• ImperialCollegeLondon / epidemia
  epidemia package
  ☆48Updated 3 years ago
• epidemics / COVIDNPIs
  Data and code for COVID-19 NPI effectiveness estimation.
  ☆30Updated 4 years ago
• rmcelreath / elements_evolutionary_anthropology
  Text project for theoretical primer on human evolutionary ecology
  ☆35Updated 3 years ago
• carolinecolijn / distancing-impact-covid19
  Model and preprint estimating impact of physical distancing measures
  ☆15Updated 5 years ago
• milkha / Splines_in_Stan
  Implementation of B-Splines in Stan
  ☆51Updated 8 years ago
• epiforecasts / covidregionaldata
  An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wh…
  ☆37Updated 2 years ago
• kbubar / vaccine_prioritization
  ☆17Updated 4 years ago
• avehtari / rhat_ess
  Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC
  ☆32Updated 4 years ago
• skdeshpande91 / flexBART
  Towards a more flexible BART
  ☆23Updated last week
• CDCgov / PyRenew
  Python package for multi-signal Bayesian renewal modeling with JAX and NumPyro.
  ☆23Updated last week
• ellisp / blog-source
  Source code for http://freerangestats.info
  ☆19Updated 3 weeks ago
• goldingn / neuts2efficacy
  modelling SARS-CoV-2 vaccine efficacy from antibody titres, and impact of waning and variants on transmission
  ☆17Updated last year
• seabbs / idmodelr
  Infectious disease model library and utilities
  ☆15Updated 3 years ago
• jrnold / bayesian_notes
  ☆37Updated 4 years ago
• rs-delve / covid19_datasets
  Interfacing several COVID-19 related datasets
  ☆45Updated 3 years ago
• betanalpha / stan_intro
  Draft introduction to probability and inference aimed at the Stan manual.
  ☆83Updated 9 years ago
• choldgraf / jupyter-book-DEPRECATED
  A jekyll-based textbook made with Jupyter Notebooks
  ☆15Updated 5 years ago
• flatironinstitute / mcmc-monitor
  Monitor MCMC runs in the browser
  ☆37Updated last year
• jgabry / stancon2018helsinki_intro
  StanCon2018 Helsinki Tutorial
  ☆30Updated 6 years ago
• rmcelreath / cmdstan_map_rect_tutorial
  Beginner tutorial for using cmdstan with multithreading
  ☆62Updated 5 years ago
• epiforecasts / covid-rt-estimates
  National and subnational estimates of the time-varying reproduction number for Covid-19
  ☆34Updated this week
• milkha / EPL
  Hierarchical Bayesian Modeling of English Premier League
  ☆22Updated 8 years ago
• robjhyndman / hdrcde
  Highest density regions and conditional density estimation
  ☆25Updated 2 years ago
• kforeman / PyMB
  Python Model Builder - fit statistical models using algorithmic differentiation
  ☆13Updated 6 years ago
• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆25Updated 6 months ago
• bob-carpenter / case-studies
  Case studies in applied and computational statistics.
  ☆39Updated 6 months ago
• atsa-es / atsar
  Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.
  ☆48Updated last year