Alternatives and similar repositories for Nanopolysaccharide-Builder

Users that are interested in Nanopolysaccharide-Builder are comparing it to the libraries listed below

• scanberg / viamd
  Visual Interactive Analysis of Molecular Dynamics
  ☆315Updated last week
• alchemistry / alchemlyb
  the simple alchemistry library
  ☆232Updated last week
• VeloxChem / VeloxChem
  VeloxChem is a Python-based open source quantum chemistry software developed for computing molecular properties and a variety of spectros…
  ☆46Updated this week
• shirtsgroup / InterMol
  Conversion tool for molecular simulations
  ☆221Updated last week
• marrink-lab / TS2CG
  TS2CG: Conversion of triangulated surfaces to (coarse grain) membrane models for molecular simulation
  ☆31Updated 9 months ago
• marrink-lab / vermouth-martinize
  Describe and apply transformation on molecular structures and topologies
  ☆135Updated last week
• Isra3l / ligpargen
  ☆78Updated last year
• Amber-MD / cpptraj
  Biomolecular simulation trajectory/data analysis.
  ☆162Updated this week
• alanwilter / acpype
  OFFICIAL: AnteChamber PYthon Parser interfacE
  ☆244Updated 2 weeks ago
• fgrunewald / Martini_PolyPly
  Tool for generating MARTINI Polymer itps and structures
  ☆17Updated 5 years ago
• MobleyLab / alchemical-analysis
  An open tool implementing some recommended practices for analyzing alchemical free energy calculations
  ☆134Updated last year
• marrink-lab / polyply_1.0
  Generate input parameters and coordinates for atomistic and coarse-grained simulations of polymers, ssDNA, and carbohydrates
  ☆182Updated last month
• patonlab / GoodVibes
  Calculate quasi-harmonic free energies from Gaussian output files with temperature and other corrections
  ☆153Updated 2 months ago
• michellab / Sire
  Sire Molecular Simulations Framework
  ☆96Updated 2 years ago
• isayevlab / AIMNet2
  ☆158Updated last year
• tblite / tblite
  Light-weight tight-binding framework
  ☆183Updated last month
• tbereau / auto_martini
  Automatic MARTINI parametrization of small organic molecules
  ☆72Updated 8 months ago
• Marcello-Sega / pytim
  a python package for the interfacial analysis of molecular simulations
  ☆94Updated last week
• Colvars / colvars
  Collective variables library for molecular simulation and analysis programs
  ☆237Updated last week
• openpathsampling / openpathsampling
  An open source Python framework for transition interface and path sampling calculations.
  ☆116Updated last month
• MobleyLab / FreeSolv
  Experimental and calculated small molecule hydration free energies
  ☆132Updated 3 years ago
• gmx2qmmm / gmx2qmmm_portable
  A python script to perform QM/MM calculation.
  ☆12Updated 3 weeks ago
• deGrootLab / pmx
  Toolkit for free-energy calculation setup/analysis and biomolecular structure handling
  ☆167Updated 5 months ago
• openforcefield / openff-toolkit
  The Open Forcefield Toolkit provides implementations of the SMIRNOFF format, parameterization engine, and other tools. Documentation avai…
  ☆379Updated last week
• choderalab / openmmtools
  A batteries-included toolkit for the GPU-accelerated OpenMM molecular simulation engine.
  ☆313Updated 3 weeks ago
• tubiana / TTClust
  clusterize molecular dynamic trajectories (amber, gromacs, charmm, namd, pdb...)
  ☆126Updated last year
• digital-chemistry-laboratory / morfeus
  A Python package for calculating molecular features
  ☆216Updated 3 weeks ago
• crest-lab / crest
  CREST - A program for the automated exploration of low-energy molecular chemical space.
  ☆289Updated last month
• openmm / openmmforcefields
  CHARMM and AMBER forcefields for OpenMM (with small molecule support)
  ☆345Updated 3 weeks ago
• fhh2626 / BFEE2
  binding free energy estimator 2
  ☆137Updated last week