The source code for the new version of the EMBL-EBI BioSamples database
☆15Updated this week
Alternatives and similar repositories for biosamples-v4
Users that are interested in biosamples-v4 are comparing it to the libraries listed below
Sorting:
- JSON validator derived from AJV supporting ontology and taxonomy validation.☆21May 22, 2025Updated 9 months ago
- Webin XML and JSON API.☆13Feb 4, 2026Updated 3 weeks ago
- Web tool to assess FAIR principles and promote their implementation☆26Updated this week
- A (primarily CSS) framework that targets needs of life science websites and services☆28Feb 19, 2026Updated last week
- This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…☆24Dec 11, 2022Updated 3 years ago
- ENA upload cli - script your Open Data upload to the European Nucleotide Archive☆29Feb 9, 2026Updated 2 weeks ago
- Prepares a SARS-CoV-2 submission for GISAID, NCBI or ENA. Can read GISAID or NCBI files, or plain fasta+tsv/csv/xls. Finds files in input…☆36May 1, 2022Updated 3 years ago
- A python wrapper for interacting with the LabArchives API.☆10Aug 10, 2022Updated 3 years ago
- Minimum Information About a Plant Phenotyping Experiment☆39Jan 7, 2026Updated last month
- ☆10Jul 9, 2024Updated last year
- Collation of metadata examples and notes for the project☆11Jan 30, 2026Updated last month
- Wrapper for the built-in Argparse, allowing missing command-line arguments to be filled in by the user via interactive prompts☆11Jun 19, 2020Updated 5 years ago
- Coderefinery project website.☆11Feb 12, 2026Updated 2 weeks ago
- A Java PoC tool used for exporting UML model artifacts from the Sparx Enterprise Architect UML tool☆16Feb 12, 2013Updated 13 years ago
- Minimalistic wrapper around the Apache HTTPClient adding Shibboleth support☆16Aug 31, 2015Updated 10 years ago
- Build project for all CEDAR Java repositories☆12Oct 20, 2025Updated 4 months ago
- Output API docs to Markdown using Griffe.☆17Feb 21, 2026Updated last week
- Custom LoginModule for Wildfly☆14Oct 7, 2015Updated 10 years ago
- A micro library containing a group of Ember.js Components that interact to create an Off-Canvas user interface.☆41Dec 31, 2016Updated 9 years ago
- Command line tool for Omeka☆11Apr 20, 2023Updated 2 years ago
- An R package for capturing and detecting SIGTERM to enable graceful shutdown.☆15Mar 11, 2021Updated 4 years ago
- IPython QGIS plugin☆13Apr 24, 2025Updated 10 months ago
- Virtual machine creation script for VMWare Fusion on Mac OS X☆11May 3, 2016Updated 9 years ago
- FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.☆13Nov 5, 2025Updated 3 months ago
- Makes URLs prettier by removing the protocol prefix.☆11Jan 26, 2025Updated last year
- Managing the progress for the RDA Working Group on Fair Mappings (https://www.rd-alliance.org/groups/fair-mappings-wg/).☆11Feb 17, 2026Updated last week
- Exposing C structrs to R☆14Apr 27, 2022Updated 3 years ago
- Infectious diseases toolkit☆15May 26, 2025Updated 9 months ago
- IPython running in a docker container. This image can be used to integrate IPython into Galaxy☆17Mar 15, 2016Updated 9 years ago
- Stanford IRT/RIT base DICOM anonymization scripts. READ DISCLAIMER.☆19Feb 12, 2026Updated 2 weeks ago
- https://www.rd-alliance.org/group/fair-data-maturity-model-wg/case-statement/fair-data-maturity-model-wg-case-statement☆14Sep 18, 2019Updated 6 years ago
- ☆13Aug 20, 2025Updated 6 months ago
- Semantic data model of the set of common data elements for rare disease registration☆12Oct 26, 2023Updated 2 years ago
- Introduction to Workflows with Common Workflow Language☆11Apr 17, 2024Updated last year
- Library for building GraphQL queries from fragments. Goes nicely with React.☆12Mar 31, 2023Updated 2 years ago
- Crate-O is a browser-based editor for Research Object Crates (RO-Crate)☆13Jan 30, 2026Updated last month
- Import and run CWL workflows on DNAnexus (alpha)☆13Sep 12, 2018Updated 7 years ago
- This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.☆13Jan 24, 2023Updated 3 years ago
- RA Synovial Single-cell Multimodal Cell Atlas☆19Mar 6, 2024Updated last year