Open source software for medical image processing from the Empenn team
☆44Mar 4, 2026Updated 2 months ago
Alternatives and similar repositories for Anima-Public
Users that are interested in Anima-Public are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Matlab toolbox to reconstruct and process MRI data☆15Jan 30, 2023Updated 3 years ago
- This docker and singularity image bundles the tgv-qsm algorithm with bet2, dcm2niix and provides a complete QSM processing pipeline.☆10Mar 10, 2022Updated 4 years ago
- Smoothing while preserving edges and coherent structures in images with anisotropic diffusion using lattice basis reduction☆10Apr 25, 2026Updated last month
- ☆18Feb 6, 2026Updated 3 months ago
- A toolkit to generate MR sequence diagrams☆15Mar 16, 2023Updated 3 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Magnetic resonance imaging and tractography with R☆30May 8, 2026Updated 3 weeks ago
- Julia toolbox for Quantitative Susceptibility Mapping☆17Feb 15, 2024Updated 2 years ago
- Polaffini - Feature-based affine and polyaffine registration.☆20Mar 30, 2026Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆79May 4, 2026Updated 3 weeks ago
- This is the code corresponding to our publication introducing ConvDecoder with physics-based regularization (CD+r) for MRI☆10Feb 6, 2026Updated 3 months ago
- Automatic BIDS architecture☆15Sep 2, 2024Updated last year
- Quantitative methods for muscle MRI☆12Mar 9, 2026Updated 2 months ago
- Simulate realistic diffusion-weighted MR data☆19Mar 2, 2023Updated 3 years ago
- High Resolution CT Template Paper and Images☆20Sep 25, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Large Medical Image Foundation Model☆19Nov 8, 2023Updated 2 years ago
- GPU accelerated source code for motion compensation of multi-stack MRI data☆64Jan 7, 2020Updated 6 years ago
- U fiber analysis: a toolbox for automated quantification of U-fibers and white matter hyperintensities☆12Dec 15, 2025Updated 5 months ago
- Not-yet-official git/annex FreeSurfer repository (https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/repo/freesurfer.git) + debian-sl…☆10May 30, 2017Updated 8 years ago
- Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2☆33Updated this week
- FSL-R Interface package☆45May 19, 2026Updated last week
- niimath - a clone of fslmaths. Try the live demo:☆78May 19, 2026Updated last week
- Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940☆16Mar 22, 2018Updated 8 years ago
- GE HealthCare MRI research☆20Jun 30, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆15Oct 1, 2021Updated 4 years ago
- DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers et…☆26May 11, 2019Updated 7 years ago
- template image processing library☆23May 17, 2026Updated last week
- A medical image converter☆32Jul 20, 2025Updated 10 months ago
- NeuroInformatics Database☆32May 22, 2026Updated last week
- Open-source eddy-current and head-motion correction for dMRI.☆20Jan 27, 2025Updated last year
- ☆37Sep 11, 2023Updated 2 years ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆59May 22, 2026Updated last week
- FRIEND engine is a new implementation of the FRIEND software, a fMRI neurofeedback processing package, already available on the NITRC re…☆16Aug 19, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- MRI simulation toolkit☆35Mar 22, 2026Updated 2 months ago
- NiiVue extension for vscode + standalone web app☆44Updated this week
- This is a mirror. Feel free to use the issue tracker. PRs welcome.☆28May 1, 2026Updated 3 weeks ago
- Automated subdivision of white matter hyperintensities☆12Jan 3, 2022Updated 4 years ago
- Matlab GUI pipeline application for quantitative susceptibility mapping (QSM)☆73Jan 20, 2026Updated 4 months ago
- dMRI based fiber tracking using parallel transport tractography☆30May 18, 2026Updated last week
- PALM: Permutation Analysis of Linear Models☆82Mar 15, 2026Updated 2 months ago