☆38Oct 20, 2025Updated 6 months ago
Alternatives and similar repositories for RDR
Users that are interested in RDR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Effector prediction pipeline based on protein properties.☆15Jul 18, 2025Updated 9 months ago
- ☆21Mar 19, 2025Updated last year
- Inference of putative transmission phylogenetic clusters☆12Oct 13, 2020Updated 5 years ago
- WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.☆13Nov 18, 2025Updated 5 months ago
- Alignment-free Phylogenetic Placement using filtered SPAced word Matches☆12Jul 19, 2023Updated 2 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- FASSO: Functional Annotations using Sequence and Structure Orthology☆10Jan 17, 2023Updated 3 years ago
- A python tool for rapidly assessing the monophyly of user-defined groups in phylogenetic trees.☆12Apr 25, 2024Updated 2 years ago
- Self-Updating Platform for the Estimation of Rates of Speciation, Migration And Relationships of Taxa☆17Jun 24, 2020Updated 5 years ago
- Graph Splitting Method☆13Jul 10, 2019Updated 6 years ago
- A bioinformatics package for creating, filtering, and manipulating supermatrices and phylogenetic datasets using GenBank and/or local seq…☆44Apr 25, 2024Updated 2 years ago
- Calculate the normalizing factors for zeroinflated sequencing data such as microbiome sequencing data☆16Jan 31, 2025Updated last year
- genomic variant frequency estimation☆11Sep 7, 2025Updated 7 months ago
- Google Play InApp Billing v3 Example☆11Mar 21, 2021Updated 5 years ago
- A tool for representing genomic potential and transcriptomic expression into KEGG pathways☆62Jul 28, 2024Updated last year
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Assign taxonomy with blast, can be used for qiime☆26Mar 25, 2025Updated last year
- Terminal viewer for pdb files☆22Jan 5, 2026Updated 3 months ago
- Software to estimate oligonucleotide duplexes melting temperature. Includes state-of-the-art monovalent (e.g., Na+) and bivalent (Mg2+) i…☆12Sep 18, 2022Updated 3 years ago
- ☆11Sep 27, 2024Updated last year
- Python version of PHLAWD☆21Oct 28, 2024Updated last year
- A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf s…☆23Aug 19, 2021Updated 4 years ago
- A repository for storing code and data related to a systematic comparison of short read taxonomy assignment tools☆16Oct 11, 2017Updated 8 years ago
- 파이썬을 이용한 한국/미국 주식 자동매매☆22Dec 6, 2022Updated 3 years ago
- A list of useful resources in the microbial colony classification and detection, such as datasets, papers, links to projects☆28Oct 1, 2022Updated 3 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- ☆23Updated this week
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Apr 21, 2026Updated last week
- Co-expression network management based on WGCNA + k-means☆22May 11, 2021Updated 4 years ago
- React's Array based Modal Supervisor☆13Dec 30, 2022Updated 3 years ago
- Primer design from single genes to whole gene families for unlocking the tree of life☆16Jun 4, 2025Updated 10 months ago
- A tool to filter BUSCO output into single-copy gene files for phylogenomics☆13Jul 24, 2024Updated last year
- The BaitFisher-package is a software package for designing hybrid enrichment probes. For more information see:☆13Oct 20, 2021Updated 4 years ago
- Library and tools to access the Windows (Vista/7) Explorer thumbnail cache database format (thumbcache.db)☆17Dec 3, 2025Updated 4 months ago
- ELECTOR: EvaLuator of Error Correction Tools for lOng Reads☆15May 27, 2021Updated 4 years ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- TreeCmp: comparison of trees in polynomial time☆14Aug 25, 2025Updated 8 months ago
- raw data from tax-credit project☆14Sep 19, 2019Updated 6 years ago
- A Python package for gene-centric taxonomic and functional classification using phylogenetic placement☆26Sep 3, 2024Updated last year
- Multiplex PCR design, in silico☆20Mar 4, 2025Updated last year
- This repository contains all source code in the reconstructor python package, installation instructions, important file dependencies, and…☆24Feb 6, 2026Updated 2 months ago
- a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).☆20Dec 5, 2023Updated 2 years ago
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆17Jan 24, 2026Updated 3 months ago