Alternatives and similar repositories for medio

Users that are interested in medio are comparing it to the libraries listed below

• rundherum / pymia
  pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
  ☆61Updated 11 months ago
• jenspetersen / probabilistic-unet
  A PyTorch implementation of the Probabilistic U-Net, applied to probabilistic glioma growth
  ☆43Updated 6 years ago
• mattiaspaul / OBELISK
  MIDL 2018 / MEDIA 2019: one binary extremely large and inflecting sparse kernel (pytorch)
  ☆44Updated 6 years ago
• MIC-DKFZ / RegRCNN
  This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…
  ☆51Updated 2 years ago
• google-deepmind / tcia-ct-scan-dataset
  Dataset of head and neck CT scans and segmentations in NRRD format.
  ☆98Updated 5 years ago
• MIC-DKFZ / probabilistic_unet
  A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.
  ☆23Updated 6 years ago
• MIC-DKFZ / mood
  Repository for the Medical Out-of-Distribution Analysis Challenge.
  ☆64Updated last year
• MIC-DKFZ / image-time-series
  Code for deep learning-based glioma/tumor growth models
  ☆27Updated 3 years ago
• Project-MONAI / MONAIBootcamp2020
  Material for the 2020 MONAI Bootcamp
  ☆64Updated 4 years ago
• fepegar / highresnet
  PyTorch implementation of HighRes3DNet
  ☆55Updated 3 months ago
• ubern-mia / MIALab
  Medical Image Analysis Lab (MIALab), University of Bern
  ☆30Updated last year
• angelomenezes / dicom-labeling-tool
  Web-based app for labeling DICOM files in Python.
  ☆21Updated 2 years ago
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆105Updated 4 years ago
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆78Updated 3 years ago
• Hsuxu / Magic-VNet
  VNet for 3d volume segmentation
  ☆44Updated 4 years ago
• ZerojumpLine / OverfittingUnderClassImbalance
  [MICCAI2019 & TMI2020] Overfitting under Class Imbalance: Anaylsis and Improvements for Medical Image Segmentation.
  ☆22Updated 2 years ago
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆99Updated 2 weeks ago
• jcreinhold / niftidataset
  pytorch dataset class for reading and transforming NIfTI files
  ☆64Updated 4 years ago
• jcreinhold / synthtorch
  deep neural network-based image translation/synthesis
  ☆27Updated 4 years ago
• sergivalverde / MRI_intensity_normalization
  Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
  ☆60Updated 3 years ago
• fepegar / staple
  Python implementation of the STAPLE segmentation algorithm
  ☆31Updated last month
• MIC-DKFZ / BodyPartRegression
  ☆76Updated last month
• anindox8 / Deep-Segmentation-Features-for-Weakly-Supervised-3D-Disease-Classification-in-Chest-CT
  Weakly supervised 3D classification of multi-disease chest CT scans using multi-resolution deep segmentation features via dual-stage CNN …
  ☆34Updated 5 years ago
• muschellij2 / ichseg
  ICH Segmentation of CT scans
  ☆27Updated 3 weeks ago
• JanaLipkova / s3
  Skull stripping and brain tissue segmentation
  ☆121Updated 6 years ago
• neheller / awesome-abdomen
  A curated list of anatomical features in the human abdomen and relevant open datasets.
  ☆21Updated 6 years ago
• HKervadec / shape_descriptors
  Code for our MIDL 2021 submission
  ☆17Updated 4 years ago
• jasonccai / HeadCTSegmentation
  Multi-class U-Net for head CT segmentation
  ☆34Updated 4 months ago
• amanbasu / 3d-prostate-segmentation
  Segmentation of prostate from MRI scans
  ☆44Updated 4 years ago
• alainjungo / reliability-challenges-uncertainty
  Assessing Reliability and Challenges of Uncertainty Estimations for Medical Image Segmentation
  ☆56Updated 2 years ago