Alternatives and similar repositories for medio

Users that are interested in medio are comparing it to the libraries listed below

• rundherum / pymia
  pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis
  ☆61Updated last year
• google-deepmind / tcia-ct-scan-dataset
  Dataset of head and neck CT scans and segmentations in NRRD format.
  ☆99Updated 5 years ago
• MIC-DKFZ / RegRCNN
  This repository holds the code framework used in the paper Reg R-CNN: Lesion Detection and Grading under Noisy Labels. It is a fork of MI…
  ☆52Updated 3 years ago
• balbasty / nitorch
  Neuroimaging in PyTorch
  ☆100Updated this week
• jenspetersen / probabilistic-unet
  A PyTorch implementation of the Probabilistic U-Net, applied to probabilistic glioma growth
  ☆43Updated 6 years ago
• fepegar / highresnet
  PyTorch implementation of HighRes3DNet
  ☆54Updated 6 months ago
• ubern-mia / MIALab
  Medical Image Analysis Lab (MIALab), University of Bern
  ☆30Updated last year
• mattiaspaul / OBELISK
  MIDL 2018 / MEDIA 2019: one binary extremely large and inflecting sparse kernel (pytorch)
  ☆44Updated 6 years ago
• MIC-DKFZ / probabilistic_unet
  A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.
  ☆23Updated 7 years ago
• Project-MONAI / MONAIBootcamp2020
  Material for the 2020 MONAI Bootcamp
  ☆65Updated 4 years ago
• MIC-DKFZ / BodyPartRegression
  ☆78Updated 4 months ago
• AnnekeMeyer / multi-planar-prostate-segmentation
  sourcecode of multi-planar prostate segmentation (ISBI publication in 2018)
  ☆17Updated 6 years ago
• ivadomed / ivadomed
  Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.
  ☆166Updated 8 months ago
• MIC-DKFZ / mood
  Repository for the Medical Out-of-Distribution Analysis Challenge.
  ☆64Updated last year
• Slicer / SlicerNotebooks
  Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
  ☆78Updated 3 years ago
• MIC-DKFZ / image-time-series
  Code for deep learning-based glioma/tumor growth models
  ☆27Updated 4 years ago
• jcreinhold / niftidataset
  pytorch dataset class for reading and transforming NIfTI files
  ☆64Updated 4 years ago
• fepegar / miccai-educational-challenge-2019
  Tutorial about combining PyTorch and NiftyNet for deep learning and medical image computing
  ☆14Updated 6 years ago
• sergivalverde / MRI_intensity_normalization
  Intensity normalization of multi-channel MRI images using the method proposed by Nyul et al. 2000
  ☆61Updated 3 years ago
• jcreinhold / synthtorch
  deep neural network-based image translation/synthesis
  ☆27Updated 4 years ago
• JanaLipkova / s3
  Skull stripping and brain tissue segmentation
  ☆121Updated 6 years ago
• ai-med / quickNAT_pytorch
  PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using…
  ☆104Updated 5 years ago
• biomedia-mira / blast-ct
  Brain Lesion Analysis and Segmentation Tool for Computed Tomography
  ☆74Updated 2 years ago
• BMIRDS / 3dMRISegmentation
  Code for NeuroImage: Clinical paper "Automatic post-stroke lesion segmentation on MR images using 3D residual convolutional neural networ…
  ☆33Updated 5 years ago
• Deep-MI / FatSegNet
  Deep CNN for Abdominal Adipose Tissue Segmentation on Dixon MRI
  ☆24Updated 3 years ago
• Hsuxu / Magic-VNet
  VNet for 3d volume segmentation
  ☆43Updated 4 years ago
• TheoEst / joint_registration_tumor_segmentation
  ☆23Updated 3 years ago
• gift-surg / fetal_brain_seg
  A toolkit for fetal brain localization and segmentation using deep learning
  ☆22Updated 6 years ago
• fepegar / staple
  Python implementation of the STAPLE segmentation algorithm
  ☆31Updated 2 months ago
• prediction2020 / unet-vessel-segmentation
  ☆35Updated 6 years ago