ARCHIVED Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical data from CC-HIC
☆57Aug 23, 2022Updated 3 years ago
Alternatives and similar repositories for cleanEHR
Users that are interested in cleanEHR are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆17Sep 20, 2023Updated 2 years ago
- Resources and documentation for UK Biobank to OMOP CDM v5.3.1 conversion☆10Oct 20, 2020Updated 5 years ago
- R tools for processing and extracting clinical information from Electronic Medical Records Databases☆65Sep 24, 2024Updated last year
- using AI model to infer patient phenotypes from identified named entities (instances of biomedical concepts)☆10Jan 13, 2023Updated 3 years ago
- This is the code and configuration for our paper, OpenSAFELY: factors associated with COVID-19-related hospital death in the linked elect…☆33Jun 6, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- HTML Tables with Dynamic Data in R Markdown☆17Oct 14, 2020Updated 5 years ago
- [Bio in Docker] Symposium 2015☆21Sep 26, 2017Updated 8 years ago
- Publication: Linked electronic health records for research on a nationwide cohort including over 54 million people in England☆19Mar 12, 2023Updated 3 years ago
- Concise interactive data summaries in R☆59Feb 24, 2020Updated 6 years ago
- Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning☆49Jan 13, 2023Updated 3 years ago
- The patient experience dashboard in Nottinghamshire Healthcare NHS Trust see: https://feedbackmatters.uk/rsconnect/experience/☆16Mar 18, 2026Updated last month
- An Example of Using Literate Programming for R Package Development☆52Jan 16, 2026Updated 3 months ago
- Wrap-up around RinteRface templates☆11Apr 10, 2019Updated 7 years ago
- Time-Sensitive Deep Learning for ICU Outcome Prediction Without Variable Selection or Cleaning.☆18Jul 6, 2020Updated 5 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analytical code developed to use with the GDPPR extract☆13Aug 26, 2021Updated 4 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆90Apr 24, 2026Updated 2 weeks ago
- CPRD Aurum codelists from the Exeter Diabetes team☆18Mar 26, 2026Updated last month
- Dockerfile for building REDCap a secure web application for building and managing online surveys and databases. http://www.project-redca…☆17Jan 15, 2016Updated 10 years ago
- An R package that enhances writing and reading data to and from SQLite databases☆38Updated this week
- Mapping the MIMIC-III database to the OMOP schema☆146Mar 17, 2024Updated 2 years ago
- Serverless R for AWS Lambda and Azure Functions☆32Jun 6, 2021Updated 4 years ago
- Hospital Data Analysis Workflow Tools☆32Dec 31, 2025Updated 4 months ago
- Library and CLI for randomly generating medical data like you might get out of an Electronic Health Records (EHR) system☆37Nov 21, 2025Updated 5 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository for managing python tools that model standoff annotations for i2b2 2014 challenge☆14May 12, 2015Updated 10 years ago
- Redesigning the Patient Portal Experience with SMART on FHIR.☆23Feb 3, 2026Updated 3 months ago
- An R package for easy parallel computing, logging, and function call automation.☆13Nov 21, 2025Updated 5 months ago
- This repository is not longer active. It used to have the only purpose of creating releases of the Standardized Vocabularies, i.e. the co…☆14Aug 12, 2020Updated 5 years ago
- intuitive software for advanced meta-analysis☆45Jul 28, 2020Updated 5 years ago
- Catalog of the schemas for RADAR-base☆16Apr 15, 2026Updated 3 weeks ago
- An R package for evaluating phenotype algorithms.☆22Apr 10, 2026Updated 3 weeks ago
- Convert DICOM-RT dose matrices to EQD2 via Python☆12Jun 8, 2021Updated 4 years ago
- Manage files in a CRAN-like repository☆25Apr 25, 2024Updated 2 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Questionnaire mobile application (Active App) for RADAR-base☆19Apr 28, 2026Updated last week
- 对OHDSI的研究☆12Apr 19, 2018Updated 8 years ago
- ☆18Updated this week
- Functions to accompany the SQL Pet book☆18Feb 29, 2020Updated 6 years ago
- MindBike Mindmapping - Android Mindmapping App compatible with Freeplane and Freemind☆14Sep 29, 2022Updated 3 years ago
- Plugins repository for dicompyler☆10Feb 24, 2018Updated 8 years ago
- [WIP] A Docker image w/ the whole stack of packages from the CRAN task view "Databases"☆15Nov 21, 2023Updated 2 years ago