pennsignals / bayes-chime
Bayesian fit to SEIR model. An extension to Penn Medicine's CHIME tool.
☆28Updated 4 years ago
Alternatives and similar repositories for bayes-chime
Users that are interested in bayes-chime are comparing it to the libraries listed below
Sorting:
- R package to implement and visualize several epidemiological forecasting methods.☆21Updated 9 months ago
- An R package with Dynamic Models of infectious diseases☆29Updated 6 months ago
- Epidemiological agent-based modelling packages in both python and C++. Published at: https://doi.org/10.5334/jors.449.☆18Updated last week
- Model-based Inference in Ecology and Epidemiology☆5Updated 4 years ago
- Estimate Realtime Case Counts and Time-varying Epidemiological Parameters☆33Updated 2 years ago
- FluSight Forecast Submissions☆19Updated last year
- A tutorial on interrupted time series regression for the evaluation of public health interventions☆23Updated last month
- Two-stage interrupted time series analysis of excess mortality in Italy during the COVID-19 pandemic☆16Updated 3 months ago
- Source code for http://freerangestats.info☆18Updated 2 weeks ago
- ☣ Risk assessment of travel-related disease spread☆18Updated last year
- R and Python packages supporting Delphi's COVIDcast effort.☆33Updated 8 months ago
- Scripts and data for Modelling reporting delay for disease surveillance data using Bayesian methods.☆15Updated 5 years ago
- Guidelines and forecasts for a collaborative U.S. influenza forecasting project.☆38Updated 5 years ago
- ☆23Updated 4 years ago
- Methods for detecting abrupt change in temporal, spatial, and spatiotemporal data series☆14Updated 2 years ago
- Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States☆27Updated last week
- Short course on parametric survival analysis☆16Updated 5 months ago
- Development and validation OHDSI network studies for the covid19 prediction topic☆9Updated 2 years ago
- Behavioral Risk Factor Surveillance System (BRFSS) data, 2014-2020☆12Updated 3 years ago
- Vivarium microsimulation tools used to model diseases and interventions.☆21Updated 2 weeks ago
- Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri☆18Updated 5 years ago
- R Package - Dynamical Systems Approach to Infectious Disease Epidemiology☆26Updated last year
- Network Models of HIV Transmission Dynamics among MSM and Heterosexuals☆25Updated last month
- Repo for the course Statistical Methods in Infectious Disease Epidemiology at UZH☆18Updated 3 years ago
- population and household microsimulation models☆21Updated 4 years ago
- R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series☆15Updated 3 weeks ago
- 📦 Your One Stop to Targeted Learning in R with the tlverse☆33Updated 3 years ago
- ☆13Updated 4 years ago
- IHME's Python data science curriculum for new employees☆29Updated 4 years ago
- a greta extension for Gaussian process modelling☆19Updated 4 months ago