pennsignals / bayes-chime

Related projects ⓘ

Alternatives and complementary repositories for bayes-chime

• cdcepi / FluSight-forecasts
  FluSight Forecast Submissions
  ☆18Updated 7 months ago
• FluSightNetwork / cdc-flusight-ensemble
  Guidelines and forecasts for a collaborative U.S. influenza forecasting project.
  ☆38Updated 4 years ago
• bob-carpenter / diagnostic-testing
  statistical models to analyze diagnostic tests
  ☆15Updated 4 years ago
• cmu-delphi / covidcast
  R and Python packages supporting Delphi's COVIDcast effort.
  ☆33Updated 3 months ago
• covidestim / covidestim
  Bayesian nowcasting with adjustment for delayed and incomplete reporting to estimate COVID-19 infections in the United States
  ☆27Updated 2 months ago
• athowes / thesis
  Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD, Imperial College London, 2023)
  ☆14Updated last month
• cmu-delphi / epiforecast-R
  R package to implement and visualize several epidemiological forecasting methods.
  ☆21Updated 4 months ago
• kingaa / short-course
  Model-based Inference in Ecology and Epidemiology
  ☆5Updated 4 years ago
• ellisp / blog-source
  Source code for http://freerangestats.info
  ☆18Updated this week
• cdcepi / FluSight-forecast-hub
  ☆27Updated this week
• cmrivers / epipy
  Python tools for epidemiology
  ☆136Updated last year
• epiforecasts / EpiNow
  Estimate Realtime Case Counts and Time-varying Epidemiological Parameters
  ☆33Updated last year
• charlesm93 / disease_transmission_workflow
  Supplementary code for paper "Bayesian workflow for disease transmission model".
  ☆27Updated 3 years ago
• regime-shifts / abrupt
  Methods for detecting abrupt change in temporal, spatial, and spatiotemporal data series
  ☆13Updated 2 years ago
• COVID-19-Mobility-Data-Network / mobility
  An R package containing functions for parsing mobility data, fitting models using Bayesian inference, and simulating mobility patterns.
  ☆24Updated 3 years ago
• mbjoseph / CARstan
  Conditional autoregressive models in Stan
  ☆33Updated last year
• epiverse-trace / cfr
  R package to estimate disease severity and under-reporting in real-time, accounting for reporting delays in epidemic time-series
  ☆13Updated 3 weeks ago
• Emergent-Epidemics / infectious_disease_predictability
  Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri
  ☆17Updated 5 years ago
• kbubar / vaccine_prioritization
  ☆17Updated 3 years ago
• ropensci / dynamite
  Bayesian Inference of Complex Panel Data
  ☆27Updated this week
• wpgp / BEARmod
  Basic Epidemic, Activity, and Response COVID-19 model
  ☆31Updated 4 years ago
• datasciencecampus / mobius
  Scripts to extract data from the COVID-19 Google Community Mobility Reports
  ☆49Updated last year
• atsa-es / atsar
  Applied time series analysis in R with Stan. Allows fast Bayesian fitting of multivariate time-series models.
  ☆49Updated 5 months ago
• stablemarkets / ChiRP
  Chinese Restaurant Process Models for Regression and Clustering. Master branch contains latest stable build.
  ☆12Updated 3 years ago
• gkonstantinoudis / ExcessDeathsCOVID
  Excess deaths due to COVID-19 pandemic in 2020
  ☆10Updated 2 years ago
• SonghuaHu-UMD / Mobility_COVID19_PNAS
  ☆12Updated 4 years ago
• SafeGraphInc / safegraph_py
  Python code for common, repeatable data wrangling and analysis of SafeGraph data
  ☆27Updated last year
• biouea / covidhm
  ☆23Updated 3 years ago
• kingaa / sbied
  Simulation-based Inference for Epidemiological Dynamics
  ☆25Updated 6 months ago
• LarremoreLab / covid_serological_sampling
  ☆13Updated 3 years ago