ochsenfeld-lab / adaptive_samplingLinks
Adaptive sampling algorithms for molecular transitions
☆23Updated last week
Alternatives and similar repositories for adaptive_sampling
Users that are interested in adaptive_sampling are comparing it to the libraries listed below
Sorting:
- Diffusion model for transition state prediction☆44Updated last year
- ☆13Updated 3 months ago
- Unified Free Energy Dynamics (UFED) simulations with OpenMM☆35Updated 2 months ago
- Code for the paper "JANUS: Parallel Tempered Genetic Algorithm Guided by Deep Neural Networks for Inverse Molecular Design"☆85Updated 3 years ago
- Code for extrapolation in materials property prediction as proposed in "Known Unknowns: Out-of-Distribution Property Prediction in Materi…☆24Updated 7 months ago
- [ICLR 2025] Official Implementation of "Towards Fast, Specialized Machine Learning Force Fields: Distilling Foundation Models via Energy …☆20Updated 6 months ago
- A package for all physics based/related models☆53Updated last year
- GemNet model in TensorFlow, as proposed in "GemNet: Universal Directional Graph Neural Networks for Molecules" (NeurIPS 2021)☆27Updated 2 years ago
- Absolute solvation free energy calculations with OpenFF and OpenMM☆25Updated 10 months ago
- python code for Multi-Coordinate Driving (MCD) method☆14Updated last year
- Force-field-enhanced Neural Networks optimized library☆59Updated last month
- SO3krates and Universal Pairwise Force Field for Molecular Simulation☆135Updated this week
- AIMNet-NSE model☆46Updated last year
- Poltype 2: Automated Parameterization for AMOEBA☆50Updated this week
- Automated reaction discovery and dataset generation with the growing string method☆21Updated 5 years ago
- Supporting data for the manuscript "Deep learning the slow modes for rare events sampling"☆21Updated last year
- Reaction Data and Molecular Conformers (RDMC) is a package dealing with reactions, molecules, conformers, majorly in 3D.☆28Updated 6 months ago
- An automated enhanced sampling generation of training sets for chemically reactive machine learning interatomic potentials☆21Updated 3 months ago
- Descriptors-free Collective Variables From Geometric Graph Neural Networks.☆12Updated 10 months ago
- Implicit Solvent Approach Based on Generalised Born and Transferable Graph Neural Networks for Molecular Dynamics Simulations☆50Updated 6 months ago
- Python program for modelling and simulating polymers.☆39Updated last week
- Bayesian Multistate Bennett Acceptance Ratio Method☆15Updated 3 weeks ago
- MACE-OFF23 models☆48Updated 9 months ago
- Accelerating Metadynamics-Based Free-Energy Calculations with Adaptive Machine Learning Potentials☆15Updated 4 years ago
- ☆12Updated 2 years ago
- Temperature generator for Replica Exchange MD simulations☆29Updated 2 years ago
- Zero Shot Molecular Generation via Similarity Kernels☆28Updated 2 months ago
- A graph neural network for the prediction of bond dissociation energies for molecules of any charge.☆64Updated last month
- Mindless molecule generator in a Python package.☆39Updated 4 months ago
- Contrastive pretraining to learn chemical reaction representations (RxnRep) for downstream tasks.☆34Updated 3 years ago