netneurolab / abagenLinks
A toolbox for working with Allen Human Brain Atlas microarray expression data
☆14Updated 11 months ago
Alternatives and similar repositories for abagen
Users that are interested in abagen are comparing it to the libraries listed below
Sorting:
- Data and code supporting Hansen et al., 2022, Nature Communications, "Local molecular and global connectomic contributions to cross-disor…☆24Updated 3 years ago
- Project your functional brain signal onto the white matter, and explore the pathways supporting brain functions.☆34Updated last year
- Data and code supporting Hansen et al., 2023 PLOS Biology "Integrating multimodal and multiscale connectivity blueprints of the human cer…☆32Updated 5 months ago
- Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute☆82Updated 7 months ago
- MRtrix scripts to generate dense weighted structural connectomes from the Human Connectome Project "minimally pre-processed" diffusion MR…☆21Updated 3 years ago
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆111Updated last year
- This toolbox includes MATLAB scripts to perform a "spin test" of anatomical correspondence between cortical surface maps, as presented in…☆55Updated 5 years ago
- Morphometric similarity in psychosis- data and code☆52Updated 6 years ago
- Code (in Matlab and R) to perform a spherical rotation (permutation) of a parcellated cortical map.☆48Updated 2 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆28Updated last year
- Maps gene samples into surface parcellation☆19Updated 8 years ago
- (version 2018) Toolbox for estimation and interpretation of whole-brain linear effective connectivity☆10Updated 6 years ago
- Subdivides the surface-based Desikan-Killiany atlas into equally sized regions. Please cite: Romero-Garcia R, Atienza M, Clemmensen LH, C…☆18Updated 2 months ago
- Brain Surrogate Maps with Autocorrelated Spatial Heterogeneity☆56Updated last year
- This repository contains a Python implementation of Morphometric INverse Divergence (MIND) calculation for the estimation of structural s…☆46Updated last year
- This is the repository for the JuSpace toolbox allowing for cross-modal correlations between imaging data and positron emission tomograph…☆63Updated 8 months ago
- A statistics and context decoding toolbox for neuroimaging.☆114Updated last month
- A toolbox for ensemble-based multimodal gene-category enrichment analysis of human neuroimaging data. DEPRICATED! Succeeded by "NiSpace"☆19Updated 7 months ago
- The Midnight Scanning Club Codebase☆38Updated 6 years ago
- A package, and script, to perform imaging transcriptomics on a neuroimaging scan.☆15Updated last year
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆17Updated last year
- This repository will host scripts used to map structural and functional brain connectivity matrices for the UK biobank dataset.☆70Updated 3 weeks ago
- ☆49Updated 4 years ago
- ☆39Updated 6 months ago
- Codes for the project "development of functional topography"☆18Updated 5 years ago
- agent-based S-I-R model for neurodegeneration☆20Updated 3 years ago
- ☆24Updated last year
- developmental cortical propagation detection + analyses☆10Updated 2 years ago
- ☆18Updated last year
- Analysis functions for surface-based analyses, using freesurfer and connectome workbench☆15Updated last year