monajemi / clusterjob

Related projects: ⓘ

• cjprybol / reproducibility-via-singularity
  A demo and tutorial for how to use git and singularity to make your research more portable and reproducible
  ☆26Updated 7 years ago
• 4QuantOSS / sge_spark
  The configuration and scripts for using spark within a Sun Grid Engine environment
  ☆23Updated 10 years ago
• OpenMendel / OpenMendel.github.io
  The main website for the OpenMendel project.
  ☆12Updated 2 years ago
• slundberg / ChromNet.jl
  Integrates any BAM/BED file into the ChromNet group graphical model.
  ☆8Updated 5 years ago
• ljdursi / Spark-Chapel-TF-UMich-2016
  Slides and materials for workshop at University of Michigan MICDE
  ☆19Updated 8 years ago
• greenelab / continuous_analysis
  Computational reproducibility using Continuous Integration to produce verifiable end-to-end runs of scientific analysis.
  ☆82Updated 3 years ago
• uci-cbcl / tree-hmm
  Tree hidden Markov model for learning epigenetic states in multiple cell types
  ☆27Updated 11 years ago
• dask / dask-drmaa
  Deploy Dask on DRMAA clusters
  ☆40Updated 3 years ago
• hpc-carpentry / hpc-python
  HPC Python lesson materials
  ☆57Updated last year
• oicr-gsi / robust-paper
  Ten Simple Rules for Making Research Software More Robust. Manuscript is published at PLoS Computational Biology. Feedback is welcome!
  ☆12Updated 7 years ago
• MicrosoftGenomics / PySnpTools
  ☆40Updated this week
• molpopgen / BigDataFormats
  Tutorial on programming or "big data"/bioinformatics
  ☆33Updated 6 years ago
• PMBio / warpedLMM
  ☆20Updated 9 years ago
• idekerlab / cyREST
  DEPRECATED. Please visit our new repository (cytoscape/cyREST)
  ☆28Updated 7 years ago
• klkeys / PLINK.jl
  Julia module to handle PLINK BED files
  ☆11Updated 6 years ago
• jupyterhub / jupyterhub-deploy-hpc
  Documented examples of Jupyterhub deployment in HPC settings
  ☆36Updated 3 months ago
• PMBio / limix-backup
  ☆45Updated 8 years ago
• brentp / slurmpy
  submit jobs to slurm with quick-and-dirty python
  ☆93Updated last year
• roryk / ipython-cluster-helper
  Tool to easily start up an IPython cluster on different schedulers.
  ☆148Updated 4 years ago
• Novartis / yap
  High throughput, pain-free big data pipelines.
  ☆30Updated 7 years ago
• lucapinello / bsub_jupyter
  Connect to a LSF main node directly or trough a ssh jump node, launch a jupyter notebook via bsub and open automatically a tunnel. The n…
  ☆20Updated 2 years ago
• clusterlib / clusterlib
  Tools to manage jobs on supercomputer
  ☆40Updated 8 years ago
• Schraiber / selection
  ☆14Updated 5 years ago
• singularityhub / singularityhub.github.io
  Container tools for scientific computing! Docs at https://singularityhub.github.io/singularityhub-docs
  ☆68Updated 2 years ago
• adrianveres / polo
  Python Optimal Leaf Ordering for Hierarchical Clustering
  ☆21Updated 7 years ago
• uwescience / software-working-group
  Materials and Jekyll website for the Wednesday software working group.
  ☆10Updated 7 years ago
• dcgerard / vicar
  Various Ideas for Confounder Adjustment in Regression
  ☆23Updated last year
• zonca / singularity-comet
  Run singularity containers on the Comet Supercomputer at San Diego Supercomputer Center
  ☆18Updated 4 years ago
• cangermueller / deepcpg_legacy
  Deep neural network for predicting methylation states of single cells
  ☆13Updated 7 years ago