mlhcmit / psetsLinks
Consolidate all problem sets into one repo
☆16Updated 4 months ago
Alternatives and similar repositories for psets
Users that are interested in psets are comparing it to the libraries listed below
Sorting:
- Code for BEHRT: Transformer for Electronic Health Records☆111Updated 2 years ago
- FlexIble Data-Driven pipeLinE – a preprocessing pipeline that transforms structured EHR data into feature vectors to be used with ML algo…☆95Updated 3 weeks ago
- Python package for machine learning for healthcare using a OMOP common data model☆110Updated 2 years ago
- AmsterdamUMCdb - Freely Accessible ICU database. Please access our Open Access manuscript at https://doi.org/10.1097/CCM.0000000000004916☆184Updated 6 months ago
- Schema definitions and Python types for Medical Event Data Standard, a standard for medical event data such as EHR and claims data☆66Updated 2 months ago
- source codes based on PyTorch to analyze EHR☆142Updated last year
- Clairvoyance: a Unified, End-to-End AutoML Pipeline for Medical Time Series☆132Updated 2 years ago
- Deprecated. For the latest MIMIC-IV code, please refer to: https://github.com/MIT-LCP/mimic-code☆284Updated 4 years ago
- ☆40Updated 3 years ago
- A collection of ETLs from common data formats to Medical Event Data Standard☆31Updated last week
- Phe2vec: Automated Disease Phenotyping based on Unsupervised Embeddings from Electronic Health Records☆24Updated 4 years ago
- [ICLR 2025] ACES: Automatic Cohort Extraction System for Event-Streams☆33Updated last month
- Python workflow for generating benchmark datasets and machine learning models from the MIMIC-IV-ED database.☆83Updated 2 years ago
- This repository contains the code used for Temporal Pointwise Convolutional Networks for Length of Stay Prediction in the Intensive Care …☆79Updated 3 months ago
- Codebase for "AutoPrognosis: Automated Clinical Prognostic Modeling via Bayesian Optimization", ICML 2018.☆56Updated 4 years ago
- Code and website related to the eICU Collaborative Research Database☆348Updated 6 months ago
- MIMIC-Extract:A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III☆449Updated 11 months ago
- ☆222Updated 3 years ago
- Code for doing machine learning with various EHRs☆21Updated 2 years ago
- Website for MIMIC-IV☆18Updated 3 years ago
- Patient Code & Text Representation Learning☆20Updated 2 years ago
- A python package for removing duplicate text in clinical notes or other documents☆37Updated 4 years ago
- This repository contains the code to replicate the data processing, modeling and reporting of our Holistic AI in Medicine (HAIM) Publicat…☆127Updated 2 years ago
- Installing MIMIC-IV in a local Postgres database☆41Updated 4 years ago
- ☆22Updated last month
- Repository for the HiRID ICU Benchmark (HiB) project☆57Updated 2 years ago
- Contains public materials for students enrolled in MITx: 6.871x, Machine Learning for Healthcare☆20Updated 4 years ago
- Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41…☆45Updated last year
- A community repository for MI_CLAIM (Minimum Information for CLinical AI Modeling) reporting standards☆23Updated 4 years ago
- ☆29Updated 3 years ago