jannisborn / paperscraper
Tools to scrape publication metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
☆305Updated last week
Alternatives and similar repositories for paperscraper:
Users that are interested in paperscraper are comparing it to the libraries listed below
- Python PDF parser for scientific publications: content and figures☆392Updated 11 months ago
- A proof of concept to scrape papers from journals☆272Updated 8 months ago
- Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.☆106Updated last month
- Unofficial Python client library for Semantic Scholar APIs.☆351Updated this week
- A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journal…☆193Updated 2 years ago
- Public space for the user community of Semantic Scholar APIs to share scripts, report issues, and make suggestions.☆215Updated 3 weeks ago
- Get answers to research questions from 200M+ papers. Link to demo -☆205Updated last year
- ChemNLP project☆156Updated this week
- Python client for GROBID Web services☆308Updated 3 weeks ago
- This is a public repository to enable researchers to begin their journey of self-hosting data from Semantic Scholar.☆40Updated 3 months ago
- ☆163Updated last year
- Parsers for scientific papers (PDF2JSON, TEX2JSON, JATS2JSON)☆356Updated 10 months ago
- Incorporating distribution of experts in order to better predict the future discovery of novel scientific connections☆29Updated last year
- A Python package to download full article PDFs from OA publications☆40Updated last month
- LitQA Eval: A difficult set of scientific questions that require context of full-text research papers to answer☆37Updated 2 months ago
- SciRepEval benchmark training and evaluation scripts☆72Updated 9 months ago
- A Python library for OpenAlex (openalex.org)☆198Updated last week
- A virtual lab of LLM agents for science research☆127Updated this week
- A toolkit for automatically extracting semantic information from PDF files of scientific articles☆70Updated last year
- ☆84Updated 9 months ago
- BERN2: an advanced neural biomedical namedentity recognition and normalization tool☆179Updated 10 months ago
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆33Updated this week
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆159Updated 10 months ago
- ☆79Updated 10 months ago
- A data set based on all arXiv publications, pre-processed for NLP, including structured full-text and citation network☆285Updated 4 months ago
- Code and examples for "Learning on Knowledge Graph Dynamics Provides Early Warning of Impactful Research".☆68Updated 2 years ago
- PyMed is a Python library that provides access to PubMed.☆203Updated 3 years ago
- [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models☆262Updated 3 months ago
- The landscape of biomedical research☆114Updated 10 months ago
- Fast, world class biomedical NER☆81Updated 2 months ago