jannisborn / paperscraper
Tools to scrape publications & their metadata from pubmed, arxiv, medrxiv, biorxiv and chemrxiv.
☆336Updated last week
Alternatives and similar repositories for paperscraper:
Users that are interested in paperscraper are comparing it to the libraries listed below
- Python PDF parser for scientific publications: content and figures☆402Updated last year
- ☆167Updated last year
- A web scraping tool to systematically extract the text of scientific papers and corresponding metadata from university accessible journal…☆198Updated 2 years ago
- LitQA Eval: A difficult set of scientific questions that require context of full-text research papers to answer☆38Updated 4 months ago
- Python toolkit for NCBI metadata (via eutils) and pubmed article text mining -- official primary repo.☆113Updated 2 months ago
- A virtual lab of LLM agents for science research☆149Updated last month
- Parsers for scientific papers (PDF2JSON, TEX2JSON, JATS2JSON)☆363Updated last year
- Unofficial Python client library for Semantic Scholar APIs.☆363Updated 2 months ago
- ChemNLP project☆159Updated last week
- ☆82Updated last year
- https://doi.org/10.1093/bioinformatics/btz228☆39Updated 4 months ago
- Public space for the user community of Semantic Scholar APIs to share scripts, report issues, and make suggestions.☆221Updated 2 months ago
- Papers about scientific hypothesis generation with large language models (LLMs).☆61Updated last month
- ☆230Updated 3 months ago
- Incorporating distribution of experts in order to better predict the future discovery of novel scientific connections☆30Updated last year
- Data from BioPlanner: Automatic Evaluation of LLMs on Protocol Planning in Biology paper☆24Updated 9 months ago
- ☆37Updated 5 months ago
- Evaluation dataset for AI systems intended to benchmark capabilities foundational to scientific research in biology☆45Updated last month
- Code for MedCPT, a model for zero-shot biomedical information retrieval.☆172Updated last year
- A toolkit for automatically extracting semantic information from PDF files of scientific articles☆72Updated last year
- The landscape of biomedical research☆115Updated last year
- This is a public repository to enable researchers to begin their journey of self-hosting data from Semantic Scholar.☆41Updated 5 months ago
- Chemcrow☆734Updated 3 months ago
- Python client for GROBID Web services☆321Updated last month
- Get answers to research questions from 200M+ papers. Link to demo -☆206Updated last year
- [ICLR 2024] Mol-Instructions: A Large-Scale Biomolecular Instruction Dataset for Large Language Models☆272Updated 5 months ago
- Code and data for the publication "Structured information extraction from scientific text with large language models" by Dagdelen & Dunn …☆98Updated last year
- Gymnasium framework for training language model agents on constructive tasks☆158Updated this week
- BioT5 (EMNLP 2023) and BioT5+ (ACL 2024 Findings)☆111Updated 7 months ago
- A Python package to download full article PDFs from OA publications☆41Updated 3 months ago