matlab and python wrap of crf and dense crf, both 2d and 3d are supported
☆170Oct 23, 2022Updated 3 years ago
Alternatives and similar repositories for SimpleCRF
Users that are interested in SimpleCRF are comparing it to the libraries listed below
Sorting:
- Uncertainty-Guided Interactive Refinement for Segmentation☆57May 21, 2021Updated 4 years ago
- geodesic distance transform of 2d/3d images☆137Jul 5, 2023Updated 2 years ago
- ☆359Feb 15, 2026Updated 2 weeks ago
- Fully-connected (dense) 3D CRF for processing biomedical scans☆138Jul 18, 2018Updated 7 years ago
- code for MICCAI 2019 paper 'Uncertainty-aware Self-ensembling Model for Semi-supervised 3D Left Atrium Segmentation'.☆531Nov 13, 2020Updated 5 years ago
- Matlab implementation of GrabCut and GraphCut for interactive image segmentation☆61Jul 23, 2019Updated 6 years ago
- How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study☆401Apr 30, 2021Updated 4 years ago
- Implementations of "Learning Euler's Elastica Model for Medical Image Segmentation"☆74Jan 10, 2021Updated 5 years ago
- Python wrapper to Philipp Krähenbühl's dense (fully connected) CRFs with gaussian edge potentials.☆2,012Mar 5, 2024Updated last year
- Dynamically Mixed Soft Pseudo-label Supervision for Scribble-Supervised Medical Image Segmentation☆28Aug 12, 2025Updated 6 months ago
- The official implementation of "CateNorm: Categorical Normalization for Robust Medical Image Segmentation"☆32Sep 30, 2022Updated 3 years ago
- Official code for "Boundary loss for highly unbalanced segmentation", runner-up for best paper award at MIDL 2019. Extended version in Me…☆720Mar 19, 2024Updated last year
- List shared papers in our group☆64Aug 12, 2024Updated last year
- SOTA medical image segmentation methods based on various challenges☆1,659Dec 12, 2023Updated 2 years ago
- Scribbles or Points-based weakly-supervised learning for medical image segmentation, a strong baseline, and tutorial for research and app…☆236Dec 9, 2023Updated 2 years ago
- ☆22Jun 18, 2021Updated 4 years ago
- This repository contains a PyTorch implementation of the MICCAI 2021 paper "Superpixel-guided Iterative Learning from Noisy Labels for Me…☆45Oct 7, 2022Updated 3 years ago
- HVSMR 2016: MICCAI Workshop on Whole-Heart and Great Vessel Segmentation from 3D Cardiovascular MRI in Congenital Heart Disease☆12Mar 11, 2020Updated 5 years ago
- This code is an implementation of "Pairwise Semantic Segmentation via Conjugate Fully Convolutional network" published at MICCAI 2019, an…☆21Oct 29, 2020Updated 5 years ago
- [MICCAI 2019 Young Scientist Award] [MEDIA 2020 Best Paper Award] Models Genesis☆773Jun 22, 2025Updated 8 months ago
- Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.☆2,603Jun 7, 2025Updated 8 months ago
- PyTorch-based implementation of Max-flow/Min-cut (graphcut) for 2D/3D data☆15Oct 24, 2022Updated 3 years ago
- Lobe Segmentation☆35May 26, 2020Updated 5 years ago
- A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.☆23Dec 17, 2018Updated 7 years ago
- A framework for data augmentation for 2D and 3D image classification and segmentation☆1,172Mar 25, 2025Updated 11 months ago
- ☆94Jun 17, 2019Updated 6 years ago
- visualize exeprimental results for image computing researches☆28Mar 26, 2022Updated 3 years ago
- A Deep Attentive Convolutional Neural Network for Automatic Cortical Plate Segmentation in Fetal MRI☆16Dec 12, 2022Updated 3 years ago
- This is the winning solution of the Endocv-2021 grand challange.☆16Jun 27, 2021Updated 4 years ago
- Semi-supervised Medical Image Segmentation through Dual-task Consistency☆330Mar 7, 2022Updated 3 years ago
- A collection of loss functions for medical image segmentation☆4,004Nov 1, 2023Updated 2 years ago
- Variant VNet family☆87Dec 28, 2020Updated 5 years ago
- Shape-aware Semi-supervised 3D Semantic Segmentation for Medical Images☆186Aug 4, 2020Updated 5 years ago
- [CVPR2021] DoDNet: Learning to segment multi-organ and tumors from multiple partially labeled datasets☆187Aug 29, 2023Updated 2 years ago
- [MedIA'22] Instance Importance-Aware Graph Convolutional Network for 3D Medical Diagnosis☆17Mar 19, 2022Updated 3 years ago
- The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net…☆1,347Jun 17, 2024Updated last year
- ☆8,076Feb 18, 2026Updated last week
- ☆29Apr 27, 2023Updated 2 years ago
- ☆31Oct 1, 2023Updated 2 years ago