dermatologist / fhiryLinks
FHIR to pandas dataframe for data analytics, AI and ML!
☆42Updated 3 weeks ago
Alternatives and similar repositories for fhiry
Users that are interested in fhiry are comparing it to the libraries listed below
Sorting:
- Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.☆51Updated last week
- FHIR Python Analysis Client and Kit (FHIRPACK) is a general purpose FHIR client that simplifies the access, analysis and representation o…☆48Updated 2 years ago
- FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured informat…☆71Updated 2 months ago
- [under development] Tools for ETL into OMOP CDM and deployment of OHDSI toolstack☆38Updated last year
- Pilot model and converter for integration of radiology data into OMOP-CDM☆23Updated 5 years ago
- ☆17Updated 7 years ago
- Data Ingestion and Harmonization☆45Updated 2 weeks ago
- NLP2FHIR: A FHIR-based Clinical Data Normalization Pipeline and Its Applications☆61Updated 3 years ago
- ☆29Updated 2 years ago
- OMOP <-> FHIR mapper☆12Updated 2 years ago
- FHIRPath implementation in Python.☆34Updated 2 years ago
- Edit and create FHIR profiles with a shiny interface ✨☆15Updated 3 years ago
- Hephaestus - ETL and ML tools for OHDSI - OMOP CDM☆13Updated 3 weeks ago
- [in development] Tools to support Natural Language Processing of freetext to create structured data elements for analysis☆33Updated last year
- ETL Tool for converting datasets to OMOP CDM☆33Updated 2 years ago
- [under development] ETL materials to support proposal for CDM enhancements for clinical trial data☆24Updated 4 years ago
- FHIR to OMOP using PySpark on AWS Glue☆14Updated 4 years ago
- MIMIC (Medical Information Mart for Intensive Care) is a large, single-center database comprising information relating to patients admitt…☆84Updated 3 weeks ago
- Web application for distributing and browsing the Standardized Vocabularies for all instances of an OMOP CDM☆70Updated last month
- Notebooks etc. Analysis of SNOMED-CT for the Clinical Coding Pilot and related work☆13Updated 4 years ago
- A web application to find patients, build cohorts and visualize health records☆53Updated this week
- CQF Clinical Reasoning on FHIR for Java☆42Updated this week
- A3 - FHIR-native ETL+Q Prototype☆14Updated 4 years ago
- Leaf Clinical Data Explorer☆97Updated 6 months ago
- eds-scikit is a Python library providing tools to process and analyse OMOP data☆43Updated 9 months ago
- Main OMOPonFHIR Settings☆45Updated 3 years ago
- Common clinical models in the forms of openEHR archetypes and GDL guidelines☆37Updated 10 months ago
- Winners of the SNOMED CT Entity Linking Challenge☆41Updated last year
- ETL engine to transform openEHR into OMOP. Loads OMOCL configuration files.☆12Updated 2 weeks ago
- [Under development] A dbt ETL project to convert a Synthea synthetic data set into the OMOP CDM☆29Updated last week