ahoopes / topofit
Rapid, topologically-correct cortical surface reconstruction
☆17Updated 2 years ago
Alternatives and similar repositories for topofit:
Users that are interested in topofit are comparing it to the libraries listed below
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- Python utilities for medical image and surface-based analysis☆29Updated 2 months ago
- The official implementation of CortexODE☆28Updated last year
- MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification☆14Updated last month
- Code for training and inference of a 3D CNN for whole-heart segmentation in CCTA☆12Updated 2 years ago
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆49Updated 2 years ago
- ☆14Updated 4 months ago
- Image, point set, and surface registration in PyTorch.☆27Updated 3 months ago
- The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow too…☆28Updated last year
- MALPEM whole-brain segmentation framework☆24Updated last year
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆20Updated last year
- Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning☆20Updated last week
- A Foundational Keypoint Model for Robust and Flexible Brain MRI Registration☆39Updated 7 months ago
- ☆19Updated 6 months ago
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆90Updated 5 months ago
- Python Implementation of the LDDMM algorithm☆51Updated 4 years ago
- ☆27Updated 2 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆49Updated 2 weeks ago
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆69Updated 6 months ago
- ☆66Updated 11 months ago
- A synthesis pipeline for annotation-free blood vessel segmentation in cerebral 3D OCTA images. Paper accepted @ MICCAI24.☆22Updated 2 months ago
- Pial Neural Network☆19Updated 3 years ago
- MIRTK based SVR reconstruction☆50Updated 3 months ago
- Joint Atlas Building and Diffeomorphic Registration Learning with Pairwise Alignment☆15Updated 2 years ago
- Statistical shape model of the heart☆44Updated 8 years ago
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆33Updated this week
- ☆26Updated last year
- a tool to segment the hypothalamus and associated subunits on T1-weighted MRI scans☆25Updated 2 years ago
- A library for performing image registration using deep learning, regularized by inverse consistency☆43Updated this week
- Gradient Surgery for Hyperparamer-free Deformable Registration in Cardiac MRI☆15Updated 11 months ago