ahoopes / topofitLinks
Rapid, topologically-correct cortical surface reconstruction
☆18Updated 2 years ago
Alternatives and similar repositories for topofit
Users that are interested in topofit are comparing it to the libraries listed below
Sorting:
- Python utilities for medical image and surface-based analysis☆31Updated last week
- The official implementation of CortexODE☆29Updated 2 years ago
- The Medical Image Analysis Laboratory Super-Resolution ToolKit (MIALSRTK) consists of a set of C++ and Python processing and workflow too…☆29Updated last year
- Code for training and inference of a 3D CNN for whole-heart segmentation in CCTA☆12Updated 3 years ago
- NiftyMIC is a research-focused toolkit for motion correction and volumetric image reconstruction of 2D ultra-fast MRI.☆150Updated 3 years ago
- This repository contains code used to prepare the LUMIERE Glioblastoma dataset.☆26Updated last year
- MALPEM whole-brain segmentation framework☆25Updated last year
- This repository contains code to apply vision transformers on surface data☆31Updated 6 months ago
- Neuroimaging in PyTorch☆97Updated 2 months ago
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆14Updated last year
- Open library for LDDMM and Metamorphosis in PyTorch☆23Updated last week
- Region- and voxel-based probabilistic mapping of whole-brain veins and arteries (densities and diameter) in the MNI space☆50Updated 2 years ago
- A framework for joint super-resolution and image synthesis, without requiring real training data☆171Updated last year
- Adaptive Riemannian Optimization for Multi-Scale Diffeomorphic Registration☆46Updated last month
- MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit☆94Updated 10 months ago
- ☆12Updated last year
- Brain CT image segmentation, normalisation, skull-stripping and total brain/intracranial volume computation.☆73Updated 11 months ago
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- Multi-modal Image Registration And Connectivity anaLysis☆45Updated this week
- Python Implementation of the LDDMM algorithm☆53Updated 4 years ago
- Pre-trained models and utilities for deep learning on medical images in Python☆228Updated this week
- MATLAB GUIs for ToF-MRA data preprocessing, cerebrovascular segmentation and quantification☆16Updated 5 months ago
- PyTorch implementation of HighRes3DNet☆54Updated last year
- A library for performing image registration using deep learning, regularized by inverse consistency☆51Updated 3 weeks ago
- Repository for training and using a contrast agnostic registration model based on the work done in SynthMorph. The contrast agnostic regi…☆11Updated last year
- This is Jupyter notebook/python code developed for a UW-Madison introductory MRI class.☆24Updated 3 months ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆54Updated 3 months ago
- AssemblyNet: 3D Whole Brain MRI segmentation pipeline☆61Updated 2 years ago
- Public release of Track-to-Learn: A general framework for tractography with deep reinforcement learning☆22Updated 3 months ago
- MIRTK based SVR reconstruction☆53Updated 3 months ago