NeuroJSON / jdata
JData: a language-independent data annotation for portable storage and interchange
☆15Updated this week
Alternatives and similar repositories for jdata:
Users that are interested in jdata are comparing it to the libraries listed below
- MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification☆21Updated last week
- Brain2Mesh - a one-liner for high-quality brain mesh generation☆37Updated last week
- Load TIFF files into matlab fast, with lazy loading☆37Updated 7 years ago
- libminc is the core library and API of the MINC toolkit☆19Updated last month
- Segment axon and myelin from microscopy data. Written in Matlab.☆19Updated 5 years ago
- 2D image registration in python, using napari.☆16Updated 3 years ago
- python bindings to the ClearVolume project that enables serving numpy data from within python to the renderer.☆15Updated 8 years ago
- C++ library and command-line software for processing and analysis of terabyte-scale volume images locally or on a computing cluster.☆54Updated this week
- Better memory-mapped files in Matlab☆11Updated 4 years ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆13Updated 4 years ago
- FluoRender is an interactive tool for confocal microscopy data analysis.☆42Updated this week
- 3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )☆44Updated 6 months ago
- Basic integration for Slack notifications for Matlab.☆21Updated 10 years ago
- GPU accelerated 3D image deconvolution using CUDA☆35Updated 8 months ago
- The ANTsX Ecosystem for Mapping the Mouse Brain☆11Updated last month
- GPU Deconvolution Library with C and Matlab API for nVidia GPUs☆21Updated 6 years ago
- Declarative dependency management for Matlab.☆28Updated last week
- Image mapping using the LDDMM algorithm, implemented in tensorflow☆16Updated 3 years ago
- clEsperanto - GPU-accelerated image processing across languages and platforms☆11Updated 4 years ago
- Shape analysis has become of increasing interest to the medical community due to its potential to precisely locate morphological changes …☆50Updated 9 months ago
- Matlab function to import ROIs from ImageJ☆27Updated 5 years ago
- Connecting Java/ImgLib2 + Python/NumPy☆30Updated last month
- Python notebooks and data for learning about image registration. Hosted at a summer school☆9Updated 6 years ago
- Marching Cubes & Mesh Simplification on multi-label 3D images.☆62Updated 2 weeks ago
- Statistical Data Analysis Toolbox for Matlab. Provides a Table class similar to R's dataframe, as well a exloratory data analysis tools.☆26Updated 11 months ago
- ☆15Updated this week
- Unified NeuroImaging Quality Control (uniQC) toolbox☆12Updated 3 years ago
- NeMo brain tractograms tool☆12Updated 4 years ago
- Panel for displaying Markdown as HTML within a MATLAB GUI☆9Updated 8 months ago
- Simple Matlab package management inspired by pip☆82Updated 4 months ago