Mark-Kramer / Case-Studies-PythonLinks
An introduction to the practicing neuroscientist to data analysis in Python
☆161Updated 2 years ago
Alternatives and similar repositories for Case-Studies-Python
Users that are interested in Case-Studies-Python are comparing it to the libraries listed below
Sorting:
- Phase-Amplitude Coupling under Python☆115Updated last year
- Frequency domain estimation and functional and directed connectivity analysis tools for electrophysiological data☆134Updated last week
- NSCI 801 (Queen's U) Quantitative Neuroscience course materials☆111Updated 9 months ago
- COGS118C [Neural Signal Processing] @ UCSanDiego☆171Updated 5 years ago
- This is a tutorial for key data analysis steps used by neuroscientists - filtering, spike extraction, PCA, clustering, and spectral analy…☆28Updated 2 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 11 months ago
- Archived code for reading data saved by the Open Ephys GUI☆60Updated 2 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Cycle-by-cycle analysis of neural oscillations.☆91Updated 3 weeks ago
- Code for internal lab sharing - polishing has started but is by no means complete☆130Updated last year
- Automatic spike sorting, cluster visualization, spike sorting GUIs☆46Updated last month
- Systems Neuroscience Computing in Python: user-friendly analysis of large-scale electrophysiology data☆54Updated 8 months ago
- This repo allows for the complete reproduction, from processed data, of all the main and supplemental figures in the manuscript Non-linea…☆25Updated 2 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆110Updated last month
- Information about Neuropixels electrode arrays☆96Updated 11 months ago
- A Matlab interface for reading and writing NWB files☆55Updated last week
- MClust is a Matlab-based spike sorting toolbox for the separation of putative cells from multi-site neurophysiological recordings. It is…☆17Updated 3 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆137Updated 4 months ago
- Real-time analysis of intracranial neurophysiology recordings.☆66Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆71Updated 2 weeks ago
- The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on ci…☆93Updated 3 weeks ago
- Tools for identifying sharp wave ripple events using LFPs☆40Updated last month
- Python-module for calculation of extracellular potentials from multicompartment neuron models and networks☆83Updated 3 weeks ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆67Updated this week
- Library to perform Slice Tensor Component Analysis (sliceTCA)☆57Updated 8 months ago
- Automatically process entire electrophysiological datasets using MNE-Python.☆155Updated last week
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 3 months ago
- A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and di…☆30Updated 2 years ago