An accurate, adaptable, and automated AI pipeline called non-human primates Brain Extraction and Segmentation Toolbox (nBEST) for processing NHPs from multi-species, multi-site, and multi-developmental stages.
☆24Dec 6, 2024Updated last year
Alternatives and similar repositories for nBEST
Users that are interested in nBEST are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆40Mar 3, 2022Updated 4 years ago
- iBEAT V2.0 Docker☆16Jan 13, 2026Updated 3 months ago
- cross-species alignment (joint-embedding between human and macaque)☆30Dec 3, 2021Updated 4 years ago
- precon_all surface pipline☆30Dec 19, 2025Updated 3 months ago
- Enhancements of HCP Pipelines for non-human primates☆30Jul 7, 2022Updated 3 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Magnetic resonance utilities. Collection of software for MR image reconstruction, mostly in python.☆10Aug 27, 2019Updated 6 years ago
- Non-linear warps between common rhesus macaque brain templates☆28Dec 5, 2025Updated 4 months ago
- NIMH Macaque Template☆19Mar 5, 2021Updated 5 years ago
- Code for paper "Robust SENSE reconstruction of simultaneous multislice EPI with low-rank enhanced coil sensitivity calibration and slice-…☆12Apr 14, 2024Updated 2 years ago
- Scripts, packages and info supporting the Neureka Challenge 2020 submission by the team Biomed Irregulars.☆12Mar 25, 2023Updated 3 years ago
- Code and materials for paper "Contrastive machine learning reveals the structure of neuroanatomical variation within Autism"☆16Feb 28, 2022Updated 4 years ago
- PREEMACS. pipeline for PREprocessing and Extraction of the MACaque brain Surface☆18May 22, 2024Updated last year
- CIVET Installer☆31Jan 29, 2022Updated 4 years ago
- Baseline methods, training scripts, and pretrained models for LUMIR challenge at Learn2Reg 2024☆32Jun 12, 2025Updated 10 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- PNH segmentation pipelines based on nipype☆24Mar 23, 2026Updated 3 weeks ago
- MATLAB toolkit for GRAPPA and Slice GRAPPA reconstruction☆17Oct 4, 2024Updated last year
- The dHCP deep learning-based neonatal structural MRI processing pipeline.☆21Oct 17, 2024Updated last year
- Pyramidal Implementation of the Lucas Kanade Feature Tracker☆18Nov 21, 2013Updated 12 years ago
- Multi-modal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms☆13Mar 9, 2023Updated 3 years ago
- 3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )☆48Aug 30, 2024Updated last year
- ☆13Aug 23, 2019Updated 6 years ago
- Real-Time Multi-Marmoset 3D Pose Tracking System☆16Jun 25, 2025Updated 9 months ago
- Spherical U-Net for icosahedron discretized spherical surface data☆17Sep 29, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆14Mar 11, 2026Updated last month
- ☆13May 10, 2020Updated 5 years ago
- UKBB MRI semantic segmentation for Abdominal Dixon and other modalities☆14Apr 8, 2026Updated last week
- A very simple GPU job scheduler - To run multiple jobs with assigned (limited) GPU resources in a dynamic way☆13Mar 31, 2024Updated 2 years ago
- ☆12Oct 24, 2025Updated 5 months ago
- Jupyter notebooks for analyzing diffusion MRI data in order to calculate DTI, DKI, NODDI, SS3T-CSD, and MSMT-CSD modelled parametric maps☆14Sep 8, 2023Updated 2 years ago
- ☆20Jul 2, 2024Updated last year
- ☆11Feb 22, 2021Updated 5 years ago
- ☆11Jul 9, 2022Updated 3 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Developing Foundation Models for Universal Segmentation from 3D Whole-Body Positron Emission Tomography☆18Mar 14, 2026Updated last month
- ☆20Apr 14, 2017Updated 9 years ago
- On-demand atlas construction for any neuroimaging study☆20Jun 11, 2025Updated 10 months ago
- Not-yet-official git/annex FreeSurfer repository (https://surfer.nmr.mgh.harvard.edu/pub/dist/freesurfer/repo/freesurfer.git) + debian-sl…☆10May 30, 2017Updated 8 years ago
- Scripts and packages to install Arch Linux Arm on Tegra K1☆10Dec 7, 2022Updated 3 years ago
- ☆12Sep 7, 2023Updated 2 years ago
- clang-tidy python wheels☆24Apr 2, 2026Updated 2 weeks ago