Alternatives and similar repositories for SirIsaac:

Users that are interested in SirIsaac are comparing it to the libraries listed below

• mackelab / delfi
  Density estimation likelihood-free inference. No longer actively developed see https://github.com/mackelab/sbi instead
  ☆73Updated 4 years ago
• earcher / vilds
  Black box variational inference for state space models
  ☆1Updated 8 years ago
• jsnowacki / xppy
  [UNMAINTAINED] XPPy is Python interface for Bard Ermentrout's XPP.
  ☆30Updated 2 years ago
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 3 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆51Updated last year
• libertyh / ising-model
  Fit an Ising model with neural spike train data using Minimum Probability Flow Learning. Based on code from Jascha Sohl-Dickstein.
  ☆18Updated 7 years ago
• AStupidBear / SpikingNeuralNetworks.jl
  Julia Spiking Neural Network Simulator
  ☆39Updated 3 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 7 years ago
• catniplab / latent_dynamics_workshop
  Exercises and examples for the latent dynamics workshop
  ☆17Updated last year
• nirum / jetplot
  🔋 Utilities for scientific python
  ☆19Updated 9 months ago
• anne-urai / largescale_recordings
  Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…
  ☆18Updated 3 years ago
• slinderman / pyglm
  Interpretable neural spike train models with fully-Bayesian inference algorithms
  ☆47Updated 6 years ago
• paulmthompson / SpikeSorting.jl
  Online spike sorting methods in Julia
  ☆12Updated 2 years ago
• sompolinsky-lab / dnn-object-manifolds
  ☆48Updated 3 years ago
• robince / pyentropy
  Information Theoretic Tools for Python
  ☆92Updated 5 years ago
• RainerEngelken / JuliaCon2017
  Slides and demos from JuliaCon 2017 on 'Event-based Simulation of Spiking Neural Networks in Julia'
  ☆16Updated 7 years ago
• neuromusic / crcnsget
  cli for downloading data from crcns.org
  ☆31Updated last year
• engellab / neuralflow
  The framework for inferring Langevin dynamics from spike data
  ☆32Updated 2 months ago
• ahwillia / PyNeuron-Toolbox
  Some python functions to supplement the NEURON python module
  ☆29Updated 5 years ago
• lyprince / lfads_demo
  Pytorch implementation of LFADS for demo at CAN workshop
  ☆19Updated 5 years ago
• scidash / neuronunit
  A package for data-driven validation of neuron and ion channel models using SciUnit
  ☆39Updated 3 years ago
• flatironinstitute / spikeforest_old
  SpikeForest -- spike sorting analysis for website
  ☆16Updated 4 years ago
• lindermanlab / PPSeq.jl
  Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
  ☆67Updated last year
• mackelab / CorBinian
  CorBinian: A toolbox for modelling and simulating high-dimensional binary and count-data with correlations
  ☆19Updated 3 years ago
• MouseLand / EnsemblePursuit
  ☆9Updated 4 years ago
• brian-team / brian2modelfitting
  Model fitting toolbox for the Brian 2 simulator
  ☆15Updated last year
• NeuralEnsemble / neurotune
  Package for fitting/optimization of NeuroML models
  ☆16Updated 2 weeks ago
• timkimd / plnde
  Code for "Inferring Latent Dynamics Underlying Neural Population Activity via Neural Differential Equations"
  ☆9Updated 3 years ago
• networkinference / ARNI
  Algorithm for Revealing Network Interactions (ARNI) from nonlinear collective dynamics
  ☆26Updated 7 years ago
• pierrebaudot / INFOTOPO
  Programs for Information Topology Data Analysis
  ☆12Updated 4 years ago