Alternatives and similar repositories for SirIsaac

Users that are interested in SirIsaac are comparing it to the libraries listed below

• mackelab / delfi
  Density estimation likelihood-free inference. No longer actively developed see https://github.com/mackelab/sbi instead
  ☆73Updated 5 years ago
• catniplab / vlgp
  Dimensionality reduction of spikes trains
  ☆49Updated 4 years ago
• gamaleldin / TME
  This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified …
  ☆18Updated 8 years ago
• slinderman / thesis
  My PhD Thesis
  ☆22Updated 9 years ago
• slinderman / pyglm
  Interpretable neural spike train models with fully-Bayesian inference algorithms
  ☆48Updated 7 years ago
• paulmthompson / SpikeSorting.jl
  Online spike sorting methods in Julia
  ☆12Updated 2 years ago
• lindermanlab / PPSeq.jl
  Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains
  ☆70Updated 2 years ago
• ganguli-lab / twpca
  🕝 Time-warped principal components analysis (twPCA)
  ☆128Updated 4 years ago
• libertyh / ising-model
  Fit an Ising model with neural spike train data using Minimum Probability Flow Learning. Based on code from Jascha Sohl-Dickstein.
  ☆19Updated 8 years ago
• sompolinsky-lab / dnn-object-manifolds
  ☆51Updated 4 years ago
• jovo / fast-oopsi
  a repository containing everything relevant to our fast non-negative deconvolution work
  ☆35Updated 9 years ago
• engellab / neuralflow
  The framework for inferring Langevin dynamics from spike data
  ☆49Updated 8 months ago
• neuromusic / crcnsget
  cli for downloading data from crcns.org
  ☆32Updated 2 years ago
• BouchardLab / DynamicalComponentsAnalysis
  Dynamical Components Analysis
  ☆33Updated 5 months ago
• ahwillia / PyNeuron-Toolbox
  Some python functions to supplement the NEURON python module
  ☆29Updated 6 years ago
• JuliaSNN / SpikingNeuralNetworks.jl
  Julia Spiking Neural Network Simulator
  ☆45Updated last month
• scidash / sciunit
  A Python framework for test-driven validation of scientific models.
  ☆51Updated 2 years ago
• pyrates-neuroscience / PyCoBi
  Python package for automated bifurcation analysis and parameter continuations, based on Auto-07p.
  ☆24Updated 5 months ago
• lyprince / lfads_demo
  Pytorch implementation of LFADS for demo at CAN workshop
  ☆19Updated 6 years ago
• catniplab / tree_structured_rslds
  Tree-structured recurrent switching linear dynamical systems
  ☆38Updated 5 years ago
• frsong / pycog
  Train excitatory-inhibitory recurrent neural networks for cognitive tasks.
  ☆55Updated 9 years ago
• ahwillia / tensor-demo
  A quickstart guide to tensor decomposition
  ☆72Updated 3 years ago
• mlcolab / sbi-workshop
  SBI Workshop jointly by Helmholtz AI + ML ⇌ Science Colaboratory
  ☆23Updated 2 years ago
• MouseLand / stringer-pachitariu-et-al-2018a
  Recordings of 10k neurons during spontaneous behaviors
  ☆54Updated last year
• nebneuron / clique-top
  Topological data analysis tools for cross correlation matrices
  ☆39Updated 2 years ago
• bwbrunton / dmd-neuro
  code to compute the Dynamic Mode Decomposition (DMD), adapted for large-scale neural recordings
  ☆27Updated 9 years ago
• berenslab / RFEst
  A Python 3 toolbox for neural receptive field estimation using splines and Gaussian priors.
  ☆27Updated last year
• KietzmannLab / EmergentPredictiveCoding
  ☆41Updated 2 years ago
• anne-urai / largescale_recordings
  Urai AE, Doiron B, Leifer AM & Churchland AK (2022) Large-scale neural recordings call for new insights to link brain and behavior. Natur…
  ☆18Updated 3 years ago
• baccuslab / pyret
  Python tools for analysis of neurophysiology data
  ☆37Updated 2 years ago