The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
☆32Nov 4, 2026Updated this week
Alternatives and similar repositories for SHiVAi
Users that are interested in SHiVAi are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆42Updated this week
- Fully automated 3D perivascular space (PVS) segmentation tool for T1w and T2w brain MRI.☆18Oct 30, 2025Updated last year
- Legacy PSMD tool, superseded by DELTA-SVD☆21Sep 24, 2026Updated last month
- # White Matter Hyperintensities (WMH) segmentation with a 3D Unet☆12Updated this week
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆18May 21, 2026Updated 5 months ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- Perivascular-space Identification Network using a Generalisable Unet☆27Oct 30, 2025Updated last year
- Detection of cerebral microbleeds using deep learning method consisting of 2 steps: initial candidate detection and candidate discriminat…☆12Mar 19, 2026Updated 7 months ago
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆27Sep 15, 2024Updated 2 years ago
- perivascular space segmentation☆17Sep 2, 2022Updated 4 years ago
- Bash script to compute DTI-ALPS☆86Sep 12, 2025Updated last year
- BOLD-CSF coupling☆25Feb 23, 2024Updated 2 years ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Mar 28, 2025Updated last year
- U fiber analysis: a toolbox for automated quantification of U-fibers and white matter hyperintensities☆13Aug 26, 2026Updated 2 months ago
- ☆13Apr 11, 2023Updated 3 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- DeepWMH: Annotation-free white matter hyperintensity (WMH) lesion segmentation tool using deep learning.☆27Jun 13, 2025Updated last year
- ☆16Oct 4, 2024Updated 2 years ago
- An automatic image analytical method to approximate the periventricular diffusivity related to glymphatic clearance integrity☆20Jul 28, 2026Updated 3 months ago
- Canonical Correlation Analysis and Partial Least Squares Toolkit for neuroscientists☆21Dec 22, 2023Updated 2 years ago
- Code and weights for "Synthetic Data for Robust Stroke Segmentation"☆14Nov 27, 2025Updated 11 months ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆14Apr 12, 2019Updated 7 years ago
- Segmentation tool for the delineation and volumetric quantification of the choroid plexus☆26Jun 2, 2025Updated last year
- The latest release of the SANDI Matlab Toolbox☆14Feb 25, 2025Updated last year
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆21Oct 4, 2024Updated 2 years ago
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Surface-based tracking for short association fibres☆11Aug 16, 2022Updated 4 years ago
- ☆10Sep 26, 2024Updated 2 years ago
- Matlab Wrapper of Surface-based Analysis. Custom Matlab functions for running analyses with FreeSurfer, CoSMoMVPA, HCP pipeline (and SamS…☆14Oct 21, 2025Updated last year
- State-of-the-art, deep learning-based segmentation of brain white matter hyperintensities (of presumed vascular origin) on MRI☆16Oct 28, 2025Updated last year
- Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps☆96Jul 31, 2025Updated last year
- ☆35Aug 27, 2026Updated 2 months ago
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆19Feb 10, 2026Updated 8 months ago
- neuroCombat R package☆29Nov 19, 2024Updated last year
- Whole Brain Segmentation and Parecllation Using OpenMAP-T1 Method for 3D T1 Brain MRI☆50Oct 27, 2026Updated last week
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- KUL/UZ NeuroImaging Suite. A set of tools for brain and spine MRI analysis.☆21Updated this week
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆20Apr 8, 2025Updated last year
- Matlab GUI pipeline application for quantitative susceptibility mapping (QSM)☆75Sep 20, 2026Updated last month
- The Brain Connectivity Toolbox: https://sites.google.com/site/bctnet/☆31Dec 16, 2020Updated 5 years ago
- eye-movement similarity analysis☆11Oct 30, 2026Updated last week
- PET Unified Pipeline☆25Oct 13, 2020Updated 6 years ago
- Toolbox for fMRI and TMS☆22Dec 1, 2024Updated last year