The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images
☆22Feb 26, 2026Updated last week
Alternatives and similar repositories for SHiVAi
Users that are interested in SHiVAi are comparing it to the libraries listed below
Sorting:
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆35Feb 25, 2026Updated last week
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆16Jul 10, 2023Updated 2 years ago
- Peak width of Skeletonized Mean Diffusivity (PSMD)☆15Nov 27, 2025Updated 3 months ago
- perivascular space segmentation☆17Sep 2, 2022Updated 3 years ago
- Perivascular-space Identification Network using a Generalisable Unet☆23Oct 30, 2025Updated 4 months ago
- ☆13Oct 4, 2024Updated last year
- BOLD-CSF coupling☆21Feb 23, 2024Updated 2 years ago
- Canonical Correlation Analysis and Partial Least Squares Toolkit for neuroscientists☆20Dec 22, 2023Updated 2 years ago
- ☆13Apr 11, 2023Updated 2 years ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆14Apr 12, 2019Updated 6 years ago
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆20Sep 15, 2024Updated last year
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Mar 28, 2025Updated 11 months ago
- AICONSlab's white matter hyperintensities (WMH) segmentation algorithm using CNNs☆20Oct 4, 2024Updated last year
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆21Apr 8, 2025Updated 11 months ago
- Segmentation tool for the delineation and volumetric quantification of the choroid plexus☆23Jun 2, 2025Updated 9 months ago
- DeepWMH: Annotation-free white matter hyperintensity (WMH) lesion segmentation tool using deep learning.☆22Jun 13, 2025Updated 8 months ago
- Bash script to compute DTI-ALPS☆73Sep 12, 2025Updated 5 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆32Jan 18, 2024Updated 2 years ago
- Computational Anatomy Toolbox for SPM12 or SPM25☆49Updated this week
- ☆11Nov 2, 2023Updated 2 years ago
- Keras implementation of DeepAnat: Diffusion MRI data analysis assisted by deep learning synthesized anatomical images☆12Feb 9, 2023Updated 3 years ago
- ☆16Oct 7, 2025Updated 5 months ago
- ☆14Jan 23, 2026Updated last month
- Dynamic positron emission tomography (PET) analysis☆14Jul 24, 2025Updated 7 months ago
- OCT layer segmentation and drusen quantification☆13Sep 28, 2023Updated 2 years ago
- Simulate metastable brain waves, plus analysis tools to quantify the dynamics.☆11Nov 26, 2019Updated 6 years ago
- ☆13Jan 28, 2025Updated last year
- EXpression PREdiction with Summary Statistics Only☆13Dec 10, 2025Updated 3 months ago
- U fiber analysis: a toolbox for automated quantification of U-fibers and white matter hyperintensities☆12Dec 15, 2025Updated 2 months ago
- ☆11Feb 23, 2026Updated 2 weeks ago
- Supplementary to "Data visualization for inference in tomographic brain imaging"☆10Sep 30, 2019Updated 6 years ago
- eye-movement similarity analysis☆10Updated this week
- Code for projecting volumetric nifti files to HCP surface and Glasser atlas parcel-wise value extraction☆13May 21, 2023Updated 2 years ago
- Evaluating methods for estimating aperiodic activity in electrophysiological data.☆16Sep 24, 2024Updated last year
- A toolbox for working with Allen Human Brain Atlas microarray expression data☆112Sep 3, 2024Updated last year
- NeuroFreq, a MATLAB Toolbox for Time-Frequency Analysis of M/EEG Data☆16Jan 2, 2026Updated 2 months ago
- Atrophy simulation from Inria Asclepios☆11Mar 6, 2020Updated 6 years ago
- QSMxT is an end-to-end software toolbox for Quantitative Susceptibility Mapping.☆56Mar 2, 2026Updated last week
- ☆12Jul 7, 2021Updated 4 years ago