iBrain-Lab / PINGU
Perivascular-space Identification Network using a Generalisable Unet
☆12Updated last month
Alternatives and similar repositories for PINGU:
Users that are interested in PINGU are comparing it to the libraries listed below
- CNN-based segmentation tool for segmenting PVS on T1 and WMH on FLAIR MRI☆13Updated last month
- Weakly supervised perivascular spaces segmentation with salient guidance of Frangi filter☆13Updated last year
- DTI-ALPS: diffusion tensor imaging along the perivascular space☆9Updated 7 months ago
- List of open-source quantitative susceptibility mapping (QSM) MRI software packages and data☆64Updated last year
- Perivascular (PVS) or Virchow–Robin Spaces (VRS) segmentation with a 3D Unet☆27Updated 6 months ago
- Single Shell Free Water Elimination Model for Diffusion Tensor Imaging☆25Updated last year
- An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images☆50Updated 9 months ago
- perivascular space segmentation☆14Updated 2 years ago
- Code for magnetic susceptibility source separation☆25Updated last month
- Segmentation of Choroid Plexus using Gaussian Mixture Model☆14Updated 3 weeks ago
- ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…☆53Updated 2 weeks ago
- Reproduce the artice Hoy et al. 2014 Optimization of a free water elimination two-compartment model for diffusion tensor imaging. Neuroim…☆13Updated 6 years ago
- MATLAB code for Multidimensional Diffusion MRI☆45Updated last month
- RadTract: enhanced tractometry with radiomics-based imaging biomarkers for improved predictive modelling.☆11Updated 10 months ago
- LST-AI - Deep Learning Ensemble for Accurate MS Lesion Segmentation☆32Updated last month
- Hongfu Sun's MATLAB codes for QSM reconstruction pipeline.☆74Updated last month
- Bash script to compute DTI-ALPS☆50Updated 2 months ago
- White matter tractography clustering and more...☆76Updated last month
- The SHiVAi pipeline for preprocessing, AI-based segmentation, and reporting of cCVSD biomarkers from brain MRI images☆13Updated last month
- ☆25Updated 2 months ago
- ☆28Updated 11 months ago
- Segmentation tool for the delineation and volumetric quantification of the choroid plexus☆15Updated last month
- ☆22Updated 3 months ago
- DICOM to NIfTI conversion, NIfTI tools☆95Updated 8 months ago
- Toolbox for parameter estimation of the Standard Model of diffusion in white matter☆24Updated last month
- A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)☆69Updated this week
- mrQ_BoxJoinBox☆22Updated last year
- ☆11Updated 2 years ago
- Ironsmith is a comprehensive, fully automated pipeline for creating and processing Quantitative Susceptibility Maps (QSM), extracting QSM…☆23Updated last year
- niimath - a clone of fslmaths. Try the live demo:☆60Updated 4 months ago