thehyve / react-mutation-plot

Related projects: ⓘ

• NCBI-Hackathons / ConsensusML
  Machine Learning to Detect Cancer Biomarkers from RNAseq Data
  ☆33Updated 5 years ago
• UMCUGenetics / IAP
  Illumina analysis pipeline
  ☆14Updated 4 years ago
• dnanexus-archive / bigtop
  A Manhattan plot in colorful virtual reality that adds frequency expression
  ☆5Updated 4 years ago
• t-neumann / slamdunk
  Streamlining SLAM-seq analysis with ultra-high sensitivity
  ☆37Updated 3 months ago
• vatlab / varianttools
  software tool for the manipulation, annotation, selection, and analysis of variants in the context of next-gen sequencing analysis
  ☆31Updated 2 years ago
• sigven / cpsr
  Cancer Predisposition Sequencing Reporter (CPSR)
  ☆56Updated last month
• drpowell / vennt
  Dynamic Venn diagrams for differential gene expression
  ☆28Updated last year
• broadinstitute / gnomad_qc
  ☆65Updated last week
• ambj / MuPeXI
  MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.
  ☆44Updated 5 years ago
• quinlan-lab / vcftidy
  normalize, left-align, trim, validate and clean VCF files
  ☆20Updated 9 years ago
• UMCUGenetics / RNASeq
  RNASeq pipeline
  ☆35Updated 4 years ago
• dnanexus / dxWDL
  Workflow Description Language compiler for the DNAnexus platform
  ☆40Updated last year
• montilab / pipeliner
  A flexible Nextflow-based framework for the definition of sequencing data processing pipelines
  ☆44Updated 4 years ago
• cancerit / cgpPindel
  Cancer Genome Project Insertion/Deletion detection pipeline based around Pindel
  ☆28Updated last week
• sbg / smart-variant-filtering
  ☆30Updated 3 years ago
• percyfal / snakemakelib
  Snakemake library for bioinformatics programs, with a focus on next-generation sequencing
  ☆22Updated 8 years ago
• slowkow / pytabix
  Retrieve data in genomic intervals with a Python interface for tabix.
  ☆83Updated 7 years ago
• Genomon-Project / paplot
  paplot creates various dynamic and interactive reports for cancer genome analysis.
  ☆25Updated last year
• s-andrews / BamQC
  Mapped QC analysis program
  ☆41Updated 6 years ago
• arq5x / piledriver
  Basic, no assumptions, multi-pileup
  ☆24Updated 10 years ago
• NCBI-Hackathons / rnaseqview
  RNA-seq Viewer Team at the NCBI-assisted Boston Genomics Hackathon
  ☆36Updated 7 years ago
• biothings / biothings.api
  BioThings API framework - Making high-performance API for biological annotation data
  ☆45Updated this week
• igordot / sns
  Analysis pipelines for genomic sequencing data
  ☆61Updated last month
• ncbi / magicblast
  ☆34Updated last year
• TrinityCTAT / ctat-mutations
  Mutation detection using GATK4 best practices and latest RNA editing filters resources. Works with both Hg38 and Hg19
  ☆73Updated 2 months ago
• DataBiosphere / job-manager
  Job Manager API and UI for interacting with asynchronous batch jobs and workflows.
  ☆26Updated 2 months ago
• ding-lab / somaticwrapper
  Detect somatic variants from tumor and normal WGS/WXS data
  ☆15Updated 2 weeks ago
• WormBase / wormbase-pipeline
  Wormbase Build Pipeline
  ☆22Updated last week
• daler / metaseq
  Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
  ☆87Updated 4 years ago
• OpenGenomics / mc3
  ☆33Updated 3 years ago