Alternatives and similar repositories for DeepTrack:

Users that are interested in DeepTrack are comparing it to the libraries listed below

• python-microscopy / python-microscopy
  The python-microscopy environment - an open-source package for light microscopy
  ☆88Updated last month
• ZhuangLab / storm-control
  Microscope control software
  ☆67Updated last month
• zitmen / thunderstorm
  ThunderSTORM: a comprehensive ImageJ plugin for SMLM data analysis and super-resolution imaging
  ☆96Updated 6 years ago
• royerlab / daxi
  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy
  ☆27Updated 6 months ago
• DeepTrackAI / DeepTrack2
  DeepTrack2 is a modular Python library for generating, manipulating, and analyzing image data pipelines for machine learning and experime…
  ☆194Updated this week
• AndrewGYork / tools
  Things we use regularly
  ☆29Updated 7 months ago
• nvladimus / npy2bdv
  Fast writing of numpy 3d-arrays into HDF5 Fiji/BigDataViewer files.
  ☆35Updated 7 months ago
• hammerlab / flowdec
  TensorFlow Deconvolution for Microscopy Data
  ☆90Updated 2 years ago
• bobpepin / YacuDecu
  GPU Deconvolution Library with C and Matlab API for nVidia GPUs
  ☆21Updated 6 years ago
• mesoSPIM / mesoSPIM-control
  Image acquisition software for mesoSPIM light-sheet microscopes.
  ☆41Updated last week
• computational-imaging / ThreeDeconv.jl
  A convex 3D deconvolution algorithm for low photon count fluorescence imaging
  ☆31Updated 3 years ago
• jungmannlab / picasso
  A collection of tools for painting super-resolution images
  ☆118Updated last month
• imodpasteur / ANNA-PALM
  Accelerating Single Molecule Localization Microscopy with Deep Learning
  ☆51Updated 2 years ago
• ZhuangLab / storm-analysis
  STORM movie analysis code
  ☆118Updated last year
• tlambert03 / PSFmodels
  Python bindings for scalar and vectorial models of the 3D microscope point spread function.
  ☆49Updated 10 months ago
• tlambert03 / pycudadecon
  Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy
  ☆63Updated 3 weeks ago
• tissue-forge / tissue-forge
  Interactive, particle-based physics, chemistry and biology modeling and simulation environment
  ☆22Updated 2 months ago
• SandoghdarLab / pyLabLib-cam-control
  Software for universal camera control and frames acquisition
  ☆19Updated 2 years ago
• mesoSPIM / mesoSPIM-hardware-documentation
  Hardware documentation for the mesoSPIM microscope project
  ☆34Updated 5 months ago
• vanTeeffelenLab / ExTrack
  ExTrack MLE for diffusive noisy single-particle tracks
  ☆13Updated this week
• cmongis / psfj
  PSFj - Know your microscope fluorescence
  ☆21Updated 5 years ago
• jries / SMAP
  ☆70Updated this week
• nimwegenLab / MiM_NikonTi
  Config and scripts used to run a Nikon Eclipse Ti in the vanNimwegen lab.
  ☆22Updated 8 months ago
• fcaprile / PyFocus
  This is PyFocus, a Python package that provides high-level functions and an user interface to perform full vectorial calculations of the …
  ☆15Updated last year
• ShuJiaLab / ACsN
  Automatic Correction for sCMOS-related Noise
  ☆17Updated 3 years ago
• fiji / microscope-image-quality
  TensorFlow-based classifier for microscope image focus quality.
  ☆17Updated 2 years ago
• tinevez / msdanalyzer
  A MATLAB class for Mean Square Displacement analysis.
  ☆36Updated 4 years ago
• FCS-analysis / PyCorrFit
  data analysis and fitting software for fluorescence correlation spectroscopy (FCS)
  ☆51Updated 8 months ago
• UU-cellbiology / ComDet
  ImageJ plugin detecting and colocalizing particles of given size (vesicles, dots, etc on biological microscopy images)
  ☆16Updated 2 years ago
• AllenCellModeling / DLITE
  Let's infer the forces that cells generate during time series by looking at the angles they make with each other.
  ☆9Updated last year