Alternatives and similar repositories for superbar

Users that are interested in superbar are comparing it to the libraries listed below

• sergivalverde / nifti_tools
  NIFTI tools for manipulating Nifty files with MATLAB.
  ☆15Updated 7 years ago
• HumanBrainED / NHP-BrainExtraction
  ☆39Updated 3 years ago
• Macatools / macapype
  PNH segmentation pipelines based on nipype
  ☆24Updated last month
• johncolby / along-tract-stats
  A MATLAB toolbox for performing along-tract analysis of diffusion tensor imaging (DTI) MRI tractography data.
  ☆45Updated 12 years ago
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆96Updated 5 months ago
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆70Updated last year
• tanguyduval / imtool3D_td
  3D Image Viewer with ROI tools for Matlab ( NIFTI viewer, Manual segmentation )
  ☆46Updated last year
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 9 months ago
• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆100Updated last week
• ncullen93 / neuroCombat
  Harmonizing neuroimaging data across scanners and sites
  ☆34Updated 5 years ago
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆74Updated 3 weeks ago
• Entodi / MeshNet
  Code and model of article "End-to-end learning of brain tissue segmentation from imperfect labeling" https://arxiv.org/abs/1612.00940
  ☆16Updated 7 years ago
• Washington-University / NHPPipelines
  Enhancements of HCP Pipelines for non-human primates
  ☆29Updated 3 years ago
• Warvito / neurocombat_sklearn
  Implementation of Combat harmonization method with scikit-learn compatible format
  ☆23Updated 5 years ago
• Chaogan-Yan / DPARSF
  Data Processing Assistant for Resting-State fMRI
  ☆27Updated 12 years ago
• sitiny / mr-to-pct
  MR to CT for TUS acoustic simulations
  ☆27Updated 6 months ago
• xiangruili / dicm2nii
  DICOM to NIfTI conversion, NIfTI tools
  ☆100Updated last week
• dmritrekker / trekker
  dMRI based fiber tracking using parallel transport tractography
  ☆27Updated 2 months ago
• spinicist / nanslice
  A Python implementation of 'dual-coding'
  ☆42Updated last year
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆101Updated 2 months ago
• nipreps / sdcflows
  Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes
  ☆43Updated 2 weeks ago
• daducci / COMMIT
  Linear framework to combine tractography and tissue microstructure estimation with diffusion MRI
  ☆47Updated this week
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆73Updated 2 months ago
• bids-apps / CPAC
  BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)
  ☆14Updated 2 weeks ago
• scilus / tractoflow
  TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity
  ☆60Updated 11 months ago
• caseypaquola / BigBrainWarp
  BigBrainWarp
  ☆27Updated 2 months ago
• ecaruyer / phantomas
  Create realistic digital phantoms in diffusion MRI.
  ☆35Updated 2 years ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆149Updated this week
• neurodesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆49Updated this week
• neurospin / pypreprocess
  Preprocessing scripts for neuro imaging
  ☆110Updated last year