mazurowski-lab / duke-dbt-data
☆37Updated 4 years ago
Alternatives and similar repositories for duke-dbt-data
Users that are interested in duke-dbt-data are comparing it to the libraries listed below
Sorting:
- End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Ma…☆65Updated 4 years ago
- Robust Brain Extraction Tool for CT Head Images☆46Updated 4 years ago
- DICOM RT-Struct to mask☆101Updated last year
- Computed tomography to body composition (Comp2Comp).☆82Updated last week
- 3D-Unet: patched based Pytorch implementation for medical images segmentation☆63Updated 3 years ago
- TotalSegmentator packaged as an AIDE Application, based on the MONAI Application Package (MAP) standard.☆25Updated last year
- Lesion and prostate masks for the PROSTATEx training dataset, after a lesion-by-lesion quality check.☆82Updated 2 years ago
- 💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model☆67Updated 7 months ago
- ☆47Updated last year
- ☆69Updated last year
- This extension contains only a module with some tools to install PyTorch inside Slicer, using the best possible version.☆34Updated last year
- Segmentation deep learning ALgorithm based on MONai toolbox: single and multi-label segmentation software developed by QIMP team-Vienna.☆122Updated 3 years ago
- SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI☆83Updated 4 months ago
- Physics-based data augmentation library for quantifying CT and CBCT images in radiotherapy [PMB'23, PMB'21, Medical Physics'21, AAPM'21]☆63Updated 2 years ago
- ☆21Updated 2 years ago
- new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks☆107Updated last year
- This is a 3D Slicer extension for segmentation and spatial reconstruction of infiltrated, collapsed, and emphysematous areas in lung CT.☆78Updated 7 months ago
- Docker for running stroke lesion core segmentation☆29Updated 4 years ago
- Skeleton segmentation in CT images☆20Updated 3 months ago
- ☆110Updated 3 months ago
- Official repository for autoPET I+II machine lerning challenge☆72Updated 9 months ago
- Workflow for Optimal Radiomics Classification☆74Updated 2 months ago
- The official repository of the 2023 Kidney Tumor Segmentation Challenge (KiTS23)☆106Updated last week
- Annotations for the PI-CAI Challenge: Public Training and Development Dataset☆59Updated 7 months ago
- Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and Simpl…☆98Updated 5 months ago
- Softmax for Arbitrary Label Trees (SALT) is a framework for training segmentation networks using conditional probabilities to model hiera…☆78Updated 7 months ago
- Providing top performing algorithms from the Brain Tumor Segmentation (BraTS) challenges.☆17Updated 2 weeks ago
- medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis☆158Updated 9 months ago
- Transparent and reproducible medical image processing pipelines in Python.☆46Updated this week
- This Repo Will contain the Preprocessing Code for 3D Medical Imaging☆199Updated 4 years ago