Alternatives and similar repositories for hodja:

Users that are interested in hodja are comparing it to the libraries listed below

• hetio / hetmatpy
  Python package for matrix storage and operations on hetnets
  ☆14Updated 2 years ago
• whitead / shout
  Async whisper
  ☆9Updated 2 years ago
• Lightning-Universe / open-bio-ml-workshop
  ☆10Updated 2 years ago
• koksal / tps
  Temporal Pathway Synthesizer
  ☆17Updated 9 months ago
• skoblov-lab / SciLK
  SciLK: a Scientific natural Language Toolkit
  ☆8Updated 6 years ago
• Future-House / BixBench
  Benchmark for LLM-based Agents in Computational Biology
  ☆30Updated 3 weeks ago
• phiweger / nanotext
  Proteins as words, genomes as documents.
  ☆20Updated 4 years ago
• kyegomez / Pairformer
  Implementation of the Pairformer model used in AlphaFold 3
  ☆12Updated this week
• ocramz / jupyter-docker-pymol
  Container-based installation of pymol, with interaction through the browser via Jupyter notebook
  ☆20Updated 5 years ago
• BZdrazil / Moving_Targets
  Repository for storing code related to the paper by Zdrazil B., Richter L., Brown N., and Guha R. "Moving Targets: Monitoring Target Tren…
  ☆9Updated 4 years ago
• verilylifesciences / site-selection-tool
  The Baseline Site Selection Tool implements simulation tools for clinical trial enrollment.
  ☆18Updated 2 years ago
• Genentech / beignet
  A standard library for biological research.
  ☆23Updated last week
• geneontology / pathways2GO
  Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
  ☆10Updated 3 weeks ago
• openvax / pepnet
  Neural networks for amino acid sequences
  ☆20Updated 7 years ago
• MilesCranmer / pysr_scaling_laws
  You should use PySR to find scaling laws. Here's an example.
  ☆33Updated last year
• pbstark / Padova15
  Materials for a 30-hour course in Statistics for Engineers, given at University of Padova
  ☆13Updated 9 years ago
• sorgerlab / famplex
  Resources for grounding protein families and complexes from text and describing their hierarchical relationships.
  ☆18Updated 9 months ago
• defnecirci / InsightGraph
  InsightGraph: A Visual Journey through Materials Articles
  ☆18Updated last year
• gyorilab / indra_db
  A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own…
  ☆16Updated this week
• seffnet / seffnet
  Network representation learning on drug-target-side effects-indication graphs for side effect prediction
  ☆13Updated 5 years ago
• gata-bio / affine-gaps
  Less-wrong single-file Numba-accelerated Python implementation of Gotoh affine gap penalty extensions for the Needleman–Wunsch, Smith-Wat…
  ☆8Updated 2 weeks ago
• charlesfrye / raskell
  RASP-L in Haskell for my fellow rascals
  ☆18Updated last year
• OpenBioML / bio-chem-lm
  ☆30Updated 2 years ago
• petermr / pyami
  Semantic Reader of the Scientific Literature
  ☆12Updated last year
• KarrLab / intro_to_wc_modeling
  Whole-cell modeling tutorials
  ☆16Updated 4 years ago
• lukasturcani / vabene
  Make valid molecular graphs!
  ☆22Updated last year
• pirl-unc / mhcgnomes
  Parsing MHC nomenclature in the wild
  ☆16Updated 3 weeks ago
• Imamachi-n / BioRxivCurator
  Batch scripts curating BioRxiv and PubMed articles by using Altmetric score.
  ☆11Updated 4 years ago
• davidar / stochaskell
  ☆13Updated 2 years ago
• krassowski / nbpipeline
  Snakemake-like pipeline manager for reproducible Jupyter Notebooks
  ☆17Updated 3 years ago