fjukstad / kvik
A framework for developing interactive data exploration applications in genomics and systems biology.
☆11Updated 7 years ago
Related projects: ⓘ
- Graph Integration Platform☆24Updated 2 weeks ago
- workflow and resource management system for bioinformatics data analysis☆69Updated 3 years ago
- Streaming relation (overlap, distance, KNN) of (any number of) sorted genomic interval sets. #golang☆47Updated 4 years ago
- example applications built using bíogo☆18Updated 3 years ago
- gTaxon - a fast cross-platform NCBI taxonomy data querying (gi2taxid, taxid2taxon, name2taxid, LCA) tool, with cmd client and REST API se…☆15Updated 8 years ago
- Python client for GA4GH htsget protocol☆15Updated last year
- QIIME 2 plugin for paired sample comparisons☆9Updated 2 weeks ago
- Burrows-Wheeler Transform and FM-index in golang☆19Updated last year
- CWL (and input file) parser for Golang, used by github.com/otiai10/yacle☆22Updated 5 years ago
- R/Shiny application for viewing microbial community data☆19Updated 3 years ago
- FDA High-performance Integrated Virtual Environment (HIVE)☆34Updated 3 years ago
- NExt generation Analysis Toolbox☆14Updated 8 years ago
- FUSE filesystem for the DNAnexus storage system☆14Updated 2 weeks ago
- An example of a data analysis pipeline using Make☆17Updated 8 years ago
- BioData Club website and project management☆11Updated 3 years ago
- Go implementation of ntHash☆20Updated 3 years ago
- Elastic, reproducible, and reusable genomic data science tools from R backed by cloud resources☆34Updated 2 years ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Updated 4 years ago
- Align short reads against viral genomes in protein space☆9Updated 6 years ago
- An object store for scientific data☆51Updated 3 years ago
- Go / Golang Bioinformatics Library☆40Updated last week
- CROP: Clustering 16s rRNA for OTU Prediction☆13Updated 7 years ago
- An R HTMLWidget for making interactive manhattan plots for GWAS.☆19Updated 9 years ago
- Write-once-read-many table for large datasets.☆28Updated 11 months ago
- ☆16Updated this week
- Utilities for analyzing mutations and neoepitopes in patient cohorts☆20Updated 6 years ago
- This project contains simple methods to measure sample relatedness and identify potential swaps and contamination☆10Updated 8 years ago
- ☆18Updated 7 years ago
- ☆12Updated 2 years ago
- beRi "beri environments for R installations" is an R environment, R installation, and R package management system for R☆14Updated 4 years ago