DakaiZhou / Vessel-Segmentation-MR-Registration
The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.
☆28Updated 3 years ago
Alternatives and similar repositories for Vessel-Segmentation-MR-Registration
Users that are interested in Vessel-Segmentation-MR-Registration are comparing it to the libraries listed below
Sorting:
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆40Updated 5 years ago
- Brain vessel segmentation using 3D convolutional neural networks☆43Updated 2 years ago
- TensorFlow implementation of the diffeomorphic demons algorithm for medical image registration☆21Updated 10 months ago
- A module for 3D image augmentations for deep learning, specifically medical images such as CT, MRI.☆27Updated 4 years ago
- 2D/3D Registration working with PatchedRayCast and ITK libraries using CPU it is from the framework by Bertelsen A., Borro D.☆38Updated 2 years ago
- ☆29Updated 5 years ago
- ITK-Based Implementation of Two-Projection 2D/3D Registration Method with an Application in Patient Setup for External Beam Radiotherapy☆53Updated last month
- Fully unsupervised 2D/3D image registration with ConvNet (TensorFlow)☆45Updated 4 years ago
- selected code for 3D-2D image registration using deep learning☆14Updated 8 months ago
- There are some examples of 3D Medical Image Process☆41Updated 5 years ago
- A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Regist…☆57Updated 2 years ago
- tf2，how to run voxelmorph☆23Updated 5 years ago
- This is a repository that contains codes to generate DRR from a CT scan☆16Updated 6 years ago
- Implementation of GroupRegNet: A Groupwise One-shot Deep Learning-based 4D Image Registration Method☆31Updated 3 years ago
- Optimization-GradientOrientation based 3D/2D registration algorithm of medical imaging☆39Updated 4 years ago
- General deep learning-based fast image registration framework for clinical thoracic 4D CT data☆40Updated 6 years ago
- Segmentation of lungs in 3D Computed Tomography (CT) scans via non-rigid image registration☆24Updated 4 years ago
- Simple code to generate Digitally Reconstructed Radiographs from MetaImage (.mhd) CT data☆21Updated 3 years ago
- GPU accelerated python library for generation of Digitally Reconstructed Radiographs (March 2018)☆61Updated 6 years ago
- Implementation of the DeepVesselNet deep learning network☆147Updated last year
- One Shot Deformable Medical Image Registration☆39Updated 5 years ago
- Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library☆18Updated 3 years ago
- Segmentation and 3D Reconstruction of Microglia and Blood Vessel☆9Updated 6 years ago
- Vessel and tube centerline extraction☆31Updated last month
- ☆12Updated 4 years ago
- A repository to develop code for IBSI compliant radiomics applications☆31Updated 3 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆52Updated last month
- 2D/3D registration between CT/MRI or STL models and X-ray images (November 2018)☆163Updated 6 years ago
- 2D/3D registration algorithm for medical images☆13Updated 4 years ago
- ☆16Updated 3 years ago