The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.
☆29May 21, 2021Updated 4 years ago
Alternatives and similar repositories for Vessel-Segmentation-MR-Registration
Users that are interested in Vessel-Segmentation-MR-Registration are comparing it to the libraries listed below
Sorting:
- Brain vessel segmentation using 3D convolutional neural networks☆43Jun 23, 2022Updated 3 years ago
- ☆12Nov 16, 2020Updated 5 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆44Mar 24, 2020Updated 5 years ago
- ☆17Jan 6, 2020Updated 6 years ago
- Cerebrovascular Image Analysis - (Matlab) Toolkit☆26Sep 18, 2022Updated 3 years ago
- ☆35Sep 17, 2019Updated 6 years ago
- ☆15Jul 14, 2021Updated 4 years ago
- # VesselEnhancementSegmentation # Language: Python 3.4 Prototype of vessel enhancement segmentation computed aided coronary artery from m…☆13Nov 8, 2017Updated 8 years ago
- ☆11May 17, 2024Updated last year
- ☆16Jul 20, 2021Updated 4 years ago
- ☆18Oct 13, 2023Updated 2 years ago
- Transfer Learning for Stenosis Detection in X-ray Coronary Angiography☆13Jul 3, 2021Updated 4 years ago
- ☆22Oct 19, 2023Updated 2 years ago
- 透過 3D Unet 將心臟的冠狀動脈(包含 左冠狀動脈、有冠狀動脈、左迴旋支、左前降支、右後降支等) 分割出來，其他的後續應用及其研究是秘密歐。 Dataset 來自聯新醫院，並自己 Label 製作而成。☆37Sep 26, 2021Updated 4 years ago
- Implementation of the DeepVesselNet deep learning network☆155Jul 7, 2023Updated 2 years ago
- Implemented algorithms for segmenting the brain in 3 segments, namely, (i) white matter, (ii) gray matter, and (iii) cerebrospinal fluid,…☆10Oct 31, 2022Updated 3 years ago
- 🔬🖥 Automated Blood Vasculature Analysis of 3D Light-Sheet Image Volumes☆53Jun 6, 2024Updated last year
- ☆15May 8, 2025Updated 10 months ago
- C++ implementation of vesselness measure (or vesselness filter). Both CPU and GPU version are available.☆43Nov 25, 2017Updated 8 years ago
- 3D cerebrovascular volume segmentation in Pytorch.☆26Aug 15, 2022Updated 3 years ago
- CNN for segmenting vasculature☆15Feb 20, 2026Updated 2 weeks ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆12Apr 9, 2021Updated 4 years ago
- IEEE-TMI 2022: code for 'Dual Consistency Enabled Weakly and Semi-Supervised Optic Disc and Cup Segmentation with Dual Adaptive Graph Con…☆13Sep 1, 2022Updated 3 years ago
- ☆11Jul 25, 2024Updated last year
- A high-performance deep-learning-based pipeline for whole-brain vasculature segmentation at the capillary resolution☆15Apr 29, 2024Updated last year
- code for Marginal loss and exclusion loss for partially supervised multi-organ segmentation☆26Jan 23, 2022Updated 4 years ago
- A pipeline to extract vessels from MR images and perform analysis. Code to my TPAMI paper "Tracking the adaptation and compensation proce…☆29Jan 11, 2022Updated 4 years ago
- Source code for CVPR 19 (Divergence Prior) & 21 (Confluent Vessel Tree) papers.☆31Jul 19, 2021Updated 4 years ago
- TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, …☆55Nov 16, 2025Updated 3 months ago
- ☆18Dec 26, 2022Updated 3 years ago
- This is the repository of the paper "Multi-view data capture for dynamic object reconstruction using handheld augmented reality mobiles"☆13Jul 7, 2021Updated 4 years ago
- BRAVE-NET: Fully Automated Brain Vessel Segmentation In Patients with Cerebrovascular Disease☆34Mar 24, 2020Updated 5 years ago
- Semantic segmentation network for X-ray angiography images, based on Deeplabv3+☆37Jul 12, 2022Updated 3 years ago
- Official repository for "C-DARL: Contrastive diffusion adversarial representation learning for label-free blood vessel segmentation"☆19Nov 15, 2023Updated 2 years ago
- [MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network☆93Jun 8, 2022Updated 3 years ago
- Joint Vessel Segmentation and Deformable Registration on Multi-Modal Retinal Images based on Style Transfer☆29Oct 11, 2019Updated 6 years ago
- Matlab code for: 1. reconstructing CT image by applying back projection, filtered back projection and convolution back projection; 2. max…☆15Sep 26, 2017Updated 8 years ago
- segment airway from lung CT image , including two networks : lung segmentation network and airway segmentation network☆12Jan 5, 2018Updated 8 years ago
- In this project, I implement an enhanced active contour method that uses discrete wavelet transform for energy minimization to increase t…☆14Dec 14, 2025Updated 2 months ago