Fully-connected (dense) 3D CRF for processing biomedical scans
☆138Jul 18, 2018Updated 7 years ago
Alternatives and similar repositories for dense3dCrf
Users that are interested in dense3dCrf are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A python wrapper for Krähenbühls dense CRF for medical image volumes.☆91May 9, 2018Updated 7 years ago
- Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans☆1,056Aug 4, 2024Updated last year
- Python wrapper to Philipp Krähenbühl's dense (fully connected) CRFs with gaussian edge potentials.☆2,014Mar 5, 2024Updated 2 years ago
- matlab and python wrap of crf and dense crf, both 2d and 3d are supported☆170Oct 23, 2022Updated 3 years ago
- Source code for the MICCAI 2016 Paper "Automatic Liver and Lesion Segmentation in CT Using Cascaded Fully Convolutional NeuralNetworks an…☆302Dec 27, 2017Updated 8 years ago
- Deploy open-source AI quickly and easily - Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- DeepMedic starter code in pytorch☆31Jan 9, 2018Updated 8 years ago
- ☆296Apr 13, 2017Updated 9 years ago
- Code for MICCAI 2016 paper : Automatic liver and lesions segmentation using Cascaded Fully Convolutional Neural Networks and 3D Condition…☆39Jan 24, 2020Updated 6 years ago
- Datasets, Transforms and Utilities specific to Biomedical Imaging☆110Jul 3, 2018Updated 7 years ago
- A lightweight MATLAB wrapper to Philipp Krähenbühl's dense (fully connected) CRFs with gaussian edge potentials.☆19Nov 23, 2015Updated 10 years ago
- Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refineme…☆29Aug 6, 2022Updated 3 years ago
- Implementation of VoxResNet for 3D brain segmentation☆66Mar 19, 2018Updated 8 years ago
- Patch-based 3D U-Net for brain tumor segmentation☆95Feb 18, 2022Updated 4 years ago
- [unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy☆1,378Apr 21, 2020Updated 5 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- A PyTorch implementation of the Probabilistic U-Net, applied to probabilistic glioma growth☆43Jul 10, 2019Updated 6 years ago
- Multi-Planar UNet for autonomous segmentation of 3D medical images☆196Sep 2, 2023Updated 2 years ago
- ☆66Oct 16, 2016Updated 9 years ago
- Official code for "Boundary loss for highly unbalanced segmentation", runner-up for best paper award at MIDL 2019. Extended version in Me…☆723Mar 19, 2024Updated 2 years ago
- BraTS18☆33Feb 18, 2022Updated 4 years ago
- GLIA: Graph Learning Library for Image Analysis☆10May 26, 2017Updated 8 years ago
- A program to evaluate the quality of image segmentations.☆329Dec 25, 2021Updated 4 years ago
- A framework for data augmentation for 2D and 3D image classification and segmentation☆1,172Mar 25, 2025Updated last year
- ☆25Apr 1, 2020Updated 6 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repository of hand corrected skullstripping for the Enhanced Rockland Sample Neurofeedback Study☆19Feb 21, 2021Updated 5 years ago
- How Distance Transform Maps Boost Segmentation CNNs: An Empirical Study☆401Apr 30, 2021Updated 4 years ago
- Instructions on how to dockerize your algorithm and additional info, as applied in the BraTS challenge☆26Sep 21, 2025Updated 6 months ago
- Brain tumor segmentation for MICCAI 2017 BraTS challenge☆327Aug 4, 2019Updated 6 years ago
- Code release for the TIP paper and MICCAI2018 paper "One-Pass Multi-task Convolutional Neural Networks for Efficient Brain Tumor Segmenta…☆34Feb 11, 2020Updated 6 years ago
- PyTorch demo of "DEMI: Discriminative Estimator of Mutual Information"☆12Dec 1, 2020Updated 5 years ago
- Autofocus Layer for Semantic Segmentation☆182May 13, 2019Updated 6 years ago
- MS lesion segmentation using cascaded 3D convolutional neural networks☆43Jun 14, 2018Updated 7 years ago
- ☆28Feb 11, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- an image registration/augmentation/segmentation package☆175Jan 8, 2023Updated 3 years ago
- A PyTorch implementation for V-Net: Fully Convolutional Neural Networks for Volumetric Medical Image Segmentation☆753Jul 6, 2018Updated 7 years ago
- This is a repository containing code to Paper "Optimized High Resolution 3D Dense-U-Net Network for Brain and Spine Segmentation" publish…☆222Apr 26, 2025Updated 11 months ago
- A U-Net combined with a variational auto-encoder that is able to learn conditional distributions over semantic segmentations.☆23Dec 17, 2018Updated 7 years ago
- ☆104Feb 11, 2019Updated 7 years ago
- This repository contains the reference implementation for our proposed Convolutional CRFs.☆567Nov 9, 2020Updated 5 years ago
- Tensorflow Code for "PHiSeg: Capturing Uncertainty in Medical Image Segmentation", Proc. MICCAI 2019☆129Nov 22, 2022Updated 3 years ago