Alternatives and similar repositories for TCGAD

Users that are interested in TCGAD are comparing it to the libraries listed below

• SBU-BMI / u24_lymphocyte
  ☆31Updated 4 years ago
• fsct135 / DCAP
  DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis
  ☆21Updated 4 years ago
• kmboehm / onco-fusion
  ☆34Updated 2 years ago
• drmaxchen-gbc / HCC-deep-learning
  HCC_Deep_learning
  ☆19Updated 5 years ago
• ruitian-olivia / IGI-DL
  Code for ST_IGI package
  ☆34Updated 5 months ago
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆56Updated 3 years ago
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆127Updated last year
• SBU-BMI / quip_distro
  ☆32Updated last year
• icbi-lab / IHCount
  IHC-image analysis workflow
  ☆23Updated 7 years ago
• Largefreedom / bio_anaylis
  the process of operating data types in the TCGA database
  ☆19Updated 5 years ago
• huangzhii / SALMON
  SALMON: Survival Analysis Learning with Multi-Omics Neural Networks
  ☆67Updated last year
• NCI-GDC / gdc-client
  GDC Data Transfer Tool
  ☆151Updated 6 months ago
• cpreid2 / gdc-rnaseq-tool
  Tool to download/merge RNASeq data from the GDC Portal in matrices identified by TCGA barcode
  ☆36Updated 5 years ago
• msk-mind / luna
  Scripts for data processing
  ☆49Updated last year
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆24Updated 2 years ago
• xinzhen-lab / OC-prediction
  ☆10Updated 2 years ago
• micrisor / NAT-ML
  ☆35Updated 4 years ago
• dnanexus / OpenBio
  ☆98Updated last year
• qalid7 / compath
  deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…
  ☆52Updated 5 years ago
• cgplab / RadAR
  A tool to perform comprehensive analysis of high-dimensional radiomic datasets
  ☆14Updated 3 years ago
• gerstung-lab / PC-CHiP
  Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
  ☆77Updated 4 years ago
• zonechen1994 / AI_TLS_segmentation
  ☆38Updated 9 months ago
• Zaoqu-Liu / MOFS
  Multimodality Fusion Subtyping (Nature Communications)
  ☆30Updated 7 months ago
• PhGK / DecodingCancer
  ☆15Updated 6 months ago
• owkin / HE2RNA_code
  Train a model to predict gene expression from histology slides.
  ☆110Updated 3 years ago
• acsbal / Automated-TIL-scoring-QuPath-Classifier-for-Melanoma
  QuPath TIL classifier for Melanoma on HE slides
  ☆10Updated 6 years ago
• dbrant / ihc-profiler
  Plugin for the quantitative analysis of immunohistochemistry samples
  ☆11Updated 8 years ago
• novasmedley / deepRadiogenomics
  Methods for training and interpreting deep radiogenomic neural networks
  ☆14Updated 5 years ago
• jnkather / DeepHistology
  A pan-cancer platform for mutation prediction from routine histology
  ☆69Updated 4 years ago
• millett / pathology_learning
  Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.
  ☆18Updated 7 years ago