Alternatives and similar repositories for TCGAD

Users that are interested in TCGAD are comparing it to the libraries listed below

• SBU-BMI / u24_lymphocyte
  ☆31Updated 4 years ago
• cclab-brca / neoadjuvant-therapy-response-predictor
  ☆56Updated 2 years ago
• drmaxchen-gbc / HCC-deep-learning
  HCC_Deep_learning
  ☆19Updated 5 years ago
• kmboehm / onco-fusion
  ☆34Updated 2 years ago
• fsct135 / DCAP
  DCAP:Integrating multi-omics data with deep learning for predicting cancer prognosis
  ☆21Updated 4 years ago
• millett / pathology_learning
  Using traditional machine learning and deep learning methods to predict stuff from TCGA pathology slides.
  ☆18Updated 7 years ago
• mdozmorov / TCGAsurvival
  Scripts to analyze TCGA data
  ☆127Updated last year
• huangzhii / SALMON
  SALMON: Survival Analysis Learning with Multi-Omics Neural Networks
  ☆67Updated last year
• Zaoqu-Liu / MOFS
  Multimodality Fusion Subtyping (Nature Communications)
  ☆29Updated 6 months ago
• micrisor / NAT-ML
  ☆35Updated 4 years ago
• lanagarmire / DeepProg
  Deep-Learning framework for multi-omic and survival data integration
  ☆86Updated last year
• msk-mind / luna
  Scripts for data processing
  ☆48Updated last year
• cgplab / RadAR
  A tool to perform comprehensive analysis of high-dimensional radiomic datasets
  ☆14Updated 3 years ago
• owkin / HE2RNA_code
  Train a model to predict gene expression from histology slides.
  ☆109Updated 3 years ago
• gerstung-lab / PC-CHiP
  Pan-cancer computational histopathology reveals mutations, tumor composition and prognosis
  ☆77Updated 4 years ago
• dnanexus / OpenBio
  ☆96Updated last year
• Cassie07 / Review_Molecular_profile_prediction_GNN
  [The Lancet Digital Health, MICCAI2020 Oral] The official code of "Spatially-aware Graph Neural Networks and Cross-level Molecular Profil…
  ☆24Updated 2 years ago
• icbi-lab / IHCount
  IHC-image analysis workflow
  ☆23Updated 7 years ago
• ruitian-olivia / IGI-DL
  Code for ST_IGI package
  ☆34Updated 4 months ago
• xinzhen-lab / OC-prediction
  ☆10Updated 2 years ago
• miargentieri / proteomic-age-ukb
  ☆48Updated 3 months ago
• jnkather / DeepHistology
  A pan-cancer platform for mutation prediction from routine histology
  ☆69Updated 4 years ago
• Largefreedom / bio_anaylis
  the process of operating data types in the TCGA database
  ☆19Updated 4 years ago
• zonechen1994 / AI_TLS_segmentation
  ☆36Updated 8 months ago
• novasmedley / deepRadiogenomics
  Methods for training and interpreting deep radiogenomic neural networks
  ☆14Updated 5 years ago
• NCI-GDC / gdc-client
  GDC Data Transfer Tool
  ☆151Updated 5 months ago
• cpreid2 / gdc-rnaseq-tool
  Tool to download/merge RNASeq data from the GDC Portal in matrices identified by TCGA barcode
  ☆36Updated 5 years ago
• TencentAILabHealthcare / MLA-GNN
  ☆44Updated 11 months ago
• qalid7 / compath
  deep learning pipeline repository for the paper "Geospatial immune variability illuminates differential evolution of lung adenocarcinoma…
  ☆52Updated 5 years ago
• AI4HEALTH-LAB-THU / LLM-Aging
  Leveraging Large Language Models to Assess Overall and Organ-specific Aging in Diverse Populations
  ☆43Updated 6 months ago