(ICML 2026) Official code repository for Protein Circuit Tracing via Cross-layer Transcoders
☆15May 14, 2026Updated 6 months ago
Alternatives and similar repositories for ProtoMech
Users that are interested in ProtoMech are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Identifying amino acids important to AlphaFold!☆11Oct 20, 2026Updated 3 weeks ago
- An open source version of EVQLV's HyperBindAI, a contrastive learning model for Ab-Ag interactivity.☆12Jun 11, 2025Updated last year
- Environment for developing substructure-aware protein models☆16Mar 26, 2026Updated 7 months ago
- ☆11Jan 31, 2026Updated 9 months ago
- Code Repository for the CVPR 2026 paper: "Learning Geospatial Representations from Models, not Data".☆14Aug 21, 2026Updated 2 months ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- (Work in Progress) A high-performance Python library for representing proteins as sets or graphs of evolutionarily conserved fragments.☆13Jan 23, 2026Updated 9 months ago
- ExplainBind: Explainable Physicochemical Determinants of Protein–Ligand Binding via Non-Covalent Interactions☆14Mar 6, 2026Updated 8 months ago
- A comprehensive resource of binding sites on human surface proteins with binder seeds☆16Feb 26, 2025Updated last year
- Accelerated protein structural generation flow-matching model based on Apple's SimpleFold.☆19May 6, 2026Updated 6 months ago
- PyTorch implementation of Deep Retina☆13Sep 15, 2025Updated last year
- A *minimal* protein structure predictor written in ~200 lines of *readable* PyTorch.☆23Oct 16, 2026Updated 3 weeks ago
- ☆16Mar 5, 2026Updated 8 months ago
- ☆12Aug 26, 2025Updated last year
- Causal Differential Networks (ICML 2025)☆17Jun 3, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆15Aug 4, 2026Updated 3 months ago
- ☆19Aug 31, 2025Updated last year
- Open-source, commercially permissive implementation of the Germinal antibody design pipeline☆21Updated this week
- PyRosetta4 v2026-02-06 with (Global Interpreter Lock) disabled☆20Mar 22, 2026Updated 7 months ago
- ☆20Aug 23, 2025Updated last year
- Official code for "How2Everything: Mining the Web for How-To Procedures to Evaluate and Improve LLMs"☆25Feb 10, 2026Updated 9 months ago
- Towards a universal foundation model for biobank-scale human genome variation☆22Dec 17, 2025Updated 10 months ago
- Prediction of Antibody CDR and protein loop flexibility☆18Sep 17, 2025Updated last year
- Accompanying Repository to TCR-TRANSLATE paper.☆12Jun 26, 2026Updated 4 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆25Aug 6, 2026Updated 3 months ago
- ☆48Jul 22, 2026Updated 3 months ago
- Collection of shallow wrappers around popular Neural Network potentials for use with the NNPot interface in the GROMACS molecular simulat…☆23Nov 2, 2026Updated last week
- Balancing Gradient Flow for Universally Better Vision Transformer Attributions☆13Nov 27, 2024Updated last year
- ☆27Aug 25, 2023Updated 3 years ago
- ☆19Jul 3, 2025Updated last year
- A protein language model for intrinsically disordered regions☆28Oct 2, 2026Updated last month
- Berkeley Single Cell Computational Microscopy dataset☆22Oct 27, 2025Updated last year
- [NeurIPS 2025] Rare Text Semantics Were Always There in Your Diffusion Transformer☆12Oct 7, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- [CVPR 2026] InstantRetouch: Efficient and High-Fidelity Instruction-Guided Image Retouching with Bilateral Space☆21Jun 5, 2026Updated 5 months ago
- Fast and Interpretable Protein Substructure Alignment via Optimal Transport (ICLR 2026)☆27Jun 26, 2026Updated 4 months ago
- Code and model weights for PoET-2, a retrieval-augmented multimodel protein language model for protein sequence generation and representa…☆32Aug 20, 2025Updated last year
- Plugin for folding sequences directly in PyMOL☆29Aug 5, 2025Updated last year
- Automated molecular dynamics simulations workflow for high-throughput assessment of protein-ligand dynamics☆24Feb 2, 2024Updated 2 years ago
- Metadiffusion implemented in Boltz-2☆25Feb 23, 2026Updated 8 months ago
- I'd like to share my experience of using a free software to create ebooks, and describe the steps I followed to achieve that. One of the …☆16Feb 9, 2016Updated 10 years ago
Are these results useful?