This repository contains the implementation for our work "Learning Topological Interactions for Multi-Class Medical Image Segmentation", accepted to ECCV 2022 (Oral)
☆84Feb 19, 2024Updated 2 years ago
Alternatives and similar repositories for TopoInteraction
Users that are interested in TopoInteraction are comparing it to the libraries listed below
Sorting:
- Structure-Aware Image Segmentation with Homotopy Warping☆12Sep 19, 2023Updated 2 years ago
- awesome-topology-driven-deep-image-analysis☆50Oct 3, 2025Updated 4 months ago
- Code for the NeurIPS 2019 paper: Topology-Preserving Deep Image Segmentation☆179Sep 19, 2023Updated 2 years ago
- ☆13Oct 2, 2022Updated 3 years ago
- Topological Priors for Image segmentation☆44Nov 27, 2019Updated 6 years ago
- ☆59Apr 23, 2025Updated 10 months ago
- DMT codes for the ICLR 2021 paper: Topology-Aware Segmentation Using Discrete Morse Theory☆48Sep 19, 2023Updated 2 years ago
- This is the pytorch implementation for TW-GAN.☆16Jun 10, 2022Updated 3 years ago
- ☆14Apr 18, 2025Updated 10 months ago
- Repository for IPMI2020 TopoTxR: A Topological Biomarker forPredicting Treatment Response in Breast Cancer☆13Mar 17, 2022Updated 3 years ago
- This repository contains the implementation for our work "Topology-Aware Uncertainty for Image Segmentation", accepted to NeurIPS 2023.☆52Feb 6, 2025Updated last year
- Persistent homology calculation for 1D (scalar time series), 2D (image), and 3D, 4D (voxel) arrays☆60Updated this week
- Joint Topology-preserving and Feature-refinement Network for Curvilinear Structure Segmentation (ICCV21)☆30Feb 7, 2022Updated 4 years ago
- The official implementation of "Semi-supervised Segmentation of Histopathology Images with Noise-Aware Topological Consistency".☆13Jul 16, 2024Updated last year
- ☆267Feb 14, 2024Updated 2 years ago
- Another implementation of topological loss☆38May 12, 2021Updated 4 years ago
- Unsupervised Learning of Diffeomorphic Image Registration via TransMorph (PyTorch)☆17Apr 30, 2025Updated 9 months ago
- Deep Vessel Segmentation by Learning Graphical Connectivity☆100Oct 15, 2019Updated 6 years ago
- [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentation☆83Dec 9, 2025Updated 2 months ago
- Code for paper "Evidence fusion with contextual discounting for multi-modality medical image segmentation"☆18Oct 9, 2022Updated 3 years ago
- SHAPR: Code for "Capturing Shape Information with Multi-Scale Topological Loss Terms for 3D Reconstruction"☆41Oct 28, 2023Updated 2 years ago
- The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmen…☆41Nov 29, 2022Updated 3 years ago
- This is a joint project between Helmholtz Imaging (located at DKFZ) and Lin Yang and Otmar Schmid (Helmholtz Munich).☆11Nov 6, 2024Updated last year
- Source code for the paper "A Medical Semantic-Assisted Transformer for Radiographic Report Generation"☆25Jun 23, 2023Updated 2 years ago
- Diff-UNet: A Diffusion Embedded Network for Volumetric Segmentation. (using diffusion for 3D medical image segmentation)☆191Mar 22, 2024Updated last year
- ☆10Nov 19, 2025Updated 3 months ago
- CS-Net (MICCAI 2019) and CS2-Net (MedIA 2020)☆107Aug 13, 2025Updated 6 months ago
- Signal compression and reconstruction on complexes preserving topological features via Discrete Morse Theory☆14May 31, 2022Updated 3 years ago
- ☆13Feb 8, 2022Updated 4 years ago
- Segmentation of blood vessel from CTA scan using bone subtraction and an iterative thresholding seeking algorithm☆12Apr 9, 2021Updated 4 years ago
- ☆17Mar 14, 2023Updated 2 years ago
- Open source for MICCAI2022 paper: [XMorpher: Full Transformer for Deformable Medical Image Registration via Cross Attention]☆76Feb 26, 2023Updated 3 years ago
- Code for MICCAI 2023 paper: Robust Segmentation via Topology Violation Detection and Feature Synthesis☆28Oct 9, 2025Updated 4 months ago
- Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)☆106Feb 9, 2024Updated 2 years ago
- Codes for our paper "Boundary-Enhanced Self-Supervised Learningfor Brain Structure Segmentation"☆23Nov 11, 2022Updated 3 years ago
- Unsupervised image segmentation by applying topological data analysis techniques.☆31Feb 13, 2020Updated 6 years ago
- [ICCV 2025] AbdomenAtlas 3.0 (9,262 CT volumes + medical reports). These “superhuman” reports are more accurate, detailed, standardized, …☆195Dec 31, 2025Updated 2 months ago
- ☆42Mar 25, 2024Updated last year
- Optimization-GradientOrientation based 3D/2D registration algorithm of medical imaging☆39Jun 2, 2020Updated 5 years ago