JamesClough / topogradLinks
Topological Priors for Image segmentation
☆44Updated 6 years ago
Alternatives and similar repositories for topograd
Users that are interested in topograd are comparing it to the libraries listed below
Sorting:
- DMT codes for the ICLR 2021 paper: Topology-Aware Segmentation Using Discrete Morse Theory☆48Updated 2 years ago
- awesome-topology-driven-deep-image-analysis☆42Updated 2 months ago
- Code and dataset for the MICCAI 2020 paper: Automated Intracranial Artery Labeling using a Graph Neural Network and Hierarchical Refineme…☆29Updated 3 years ago
- Persistent homology calculation for 1D (scalar time series), 2D (image), and 3D, 4D (voxel) arrays☆56Updated 2 weeks ago
- The PyTorch re-implement of a branch-aware coronary centerline extraction in CT Angiography images. (paper: 'Branch-Aware Double DQN for …☆13Updated 4 months ago
- This repository contains the implementation for our work "Learning Topological Interactions for Multi-Class Medical Image Segmentation", …☆83Updated last year
- Overview of architecture and implementation of TEDS-Net, as described in MICCAI 2021: "TEDS-Net: Enforcing Diffeomorphisms in Spatial Tra…☆23Updated 2 years ago
- SDNet Keras implementation☆44Updated 5 years ago
- Trained with just raw 3D volumes, a single Sli2Vol model can be used to propagate a single-slice annotation to the whole 3D volume, for a…☆27Updated 2 years ago
- A variational Bayesian method for similarity learning in non-rigid image registration (CVPR 2022)☆20Updated 3 years ago
- MvMM-RegNet: A new image registration framework based on multivariate mixture model and neural network estimation (MICCAI 2020)☆31Updated last year
- [NeurIPS 2024] Official repository for "Physics-Regularized Multi-Modal Image Assimilation for Brain Tumor Localization"☆19Updated 11 months ago
- A dataset of whole heart and great vessel segmentation of chd_segmentation is published.☆27Updated 2 years ago
- [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling☆42Updated last year
- [MedIA‘25] Efficient anatomical labeling of pulmonary tree structures via deep point-graph representation-based implicit fields☆40Updated last year
- Code for MICCAI 2023 paper: Robust Segmentation via Topology Violation Detection and Feature Synthesis☆27Updated 2 months ago
- Structure-Aware Image Segmentation with Homotopy Warping☆12Updated 2 years ago
- [ICCV 2021] Generative Adversarial Registration for Improved Conditional Deformable Templates☆50Updated 2 years ago
- [MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation☆40Updated 6 months ago
- ☆27Updated 2 years ago
- ☆121Updated 8 months ago
- OCT preprocessing: Fully Convolutional Boundary Regression for Retina OCT Segmentation☆52Updated 5 years ago
- Another implementation of topological loss☆37Updated 4 years ago
- Evaluation code of CHAOS challenge in MATLAB, Python and Julia languages.☆57Updated 6 years ago
- ☆26Updated 3 years ago
- ☆23Updated 3 years ago
- This is the official Pytorch implementation of "Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative a…☆45Updated 2 years ago
- 3D vessel-like structure segmentation in pytorch☆31Updated 2 years ago
- ☆33Updated 2 years ago
- One Shot Deformable Medical Image Registration☆40Updated 5 years ago