Alternatives and similar repositories for docker-images

Users that are interested in docker-images are comparing it to the libraries listed below

• nipreps / niworkflows
  Common workflows for MRI (anatomical, functional, diffusion, etc)
  ☆104Updated this week
• bids-apps / freesurfer
  BIDS app wrapping recon-all from FreeSurfer
  ☆43Updated 3 weeks ago
• rordenlab / niimath
  niimath - a clone of fslmaths. Try the live demo:
  ☆70Updated this week
• Deep-MI / fsqc
  A set of quality control scripts for FreeSurfer- and FastSurfer-processed structural MRI data
  ☆65Updated last month
• nipreps / dmriprep
  dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual interv…
  ☆71Updated this week
• PennLINC / qsiprep
  Preprocessing of diffusion MRI
  ☆165Updated 2 months ago
• nipreps / smriprep
  Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)
  ☆152Updated this week
• PennLINC / aslprep
  Preprocessing of arterial spin labeling (ASL) data
  ☆51Updated this week
• UNFmontreal / Dcm2Bids
  Reorganising NIfTI files from dcm2niix into the Brain Imaging Data Structure
  ☆186Updated this week
• Aswendt-Lab / AIDAmri
  Atlas-based Imaging Data Analysis Pipeline (AIDA) for structural and functional MRI of the mouse brain
  ☆31Updated last week
• layerfMRI / LAYNII
  Stand alone fMRI software suite for layer-fMRI analyses.
  ☆103Updated this week
• jmtyszka / bidskit
  Utility functions for working with DICOM and BIDS neuroimaging data
  ☆64Updated 2 months ago
• nipy / heudiconv
  Flexible DICOM conversion into structured directory layouts
  ☆268Updated 3 weeks ago
• MASILab / PreQual
  An automated pipeline for integrated preprocessing and quality assurance of diffusion weighted MRI images
  ☆52Updated last year
• scilus / scilpy
  The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox
  ☆77Updated last week
• hMRI-group / hMRI-toolbox
  A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
  ☆72Updated last week
• MASILab / Synb0-DISCO
  Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
  ☆79Updated 2 months ago
• Qoala-T / QC
  Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data
  ☆77Updated 4 years ago
• raamana / visualqc
  VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.
  ☆74Updated 3 months ago
• BrkRaw / brkraw
  BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data
  ☆47Updated 2 weeks ago
• neurodesk / neurodesktop
  The plug-and-play, browser-accessible, containerised data analysis environment.
  ☆52Updated this week
• srikash / presurfer
  Scripts to prepare MP2RAGE for Freesurfer
  ☆29Updated last year
• CoBrALab / RABIES
  fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit the full documentation at https://rabies.readthedocs.io/
  ☆46Updated last week
• nighres / nighres
  Processing tools for high-resolution neuroimaging
  ☆71Updated 10 months ago
• yeatmanlab / pyAFQ
  Please visit our new location: https://github.com/tractometry/pyAFQ
  ☆59Updated last year
• ExploreASL / ExploreASL
  ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.muts…
  ☆54Updated last week
• JosePMarques / MP2RAGE-related-scripts
  MP2RAGE Scripts - T1 map correction & Background noise removal
  ☆67Updated 2 years ago
• yeatmanlab / AFQ
  Automated Fiber Quantification
  ☆77Updated last year
• Conxz / multiBrain
  A list of brain imaging datasets with multiple scans per subject. Feel free to update the list via 'pull requests'!
  ☆98Updated 7 months ago
• templateflow / templateflow
  The TemplateFlow Archive - A DataLad super-dataset
  ☆91Updated 2 weeks ago