Alternatives and similar repositories for picai_prep

Users that are interested in picai_prep are comparing it to the libraries listed below

• DIAGNijmegen / picai_labels
  Annotations for the PI-CAI Challenge: Public Training and Development Dataset
  ☆66Updated 5 months ago
• DIAGNijmegen / picai_baseline
  Baseline AI models for 3D csPCa detection/diagnosis in bpMRI
  ☆54Updated 9 months ago
• The-Veeraraghavan-Lab / SMIT
  Self distilled masked transformer based segmentor used in MICCAI 2022 paper by Jiang J, ... Veeraraghavan H et.al
  ☆30Updated 2 years ago
• lab-midas / autoPET
  Official repository for autoPET I+II machine lerning challenge
  ☆82Updated last year
• mist-medical / MIST
  MIST: A simple and scalable end-to-end framework for 3D medical imaging segmentation.
  ☆52Updated 3 months ago
• kbressem / prostate158
  ☆36Updated last year
• PRESENT-Y / TaG-Net
  [IEEE-TMI'23] TaG-Net: Topology-aware Graph Network for Centerline-based Vessel Labeling
  ☆42Updated last year
• MIC-DKFZ / LesionLocator
  LesionLocator is a framework for zero-shot lesion segmentation and longitudinal tumor tracking in 3D full-body imaging.
  ☆76Updated 2 months ago
• Novestars / Neural_Pre_Processing
  Neural Pre Processing is an end-to-end weakly supervised learning approach for converting raw head MRI images to intensity-normalized, sk…
  ☆30Updated last year
• mazurowski-lab / SegmentAnyBone
  SegmentAnyBone: A Universal Model that Segments Any Bone at Any Location on MRI
  ☆113Updated 11 months ago
• DIAGNijmegen / prostateMR_3D-CAD-csPCa
  Hierarchical probabilistic 3D U-Net, with attention mechanisms (—𝘈𝘵𝘵𝘦𝘯𝘵𝘪𝘰𝘯 𝘜-𝘕𝘦𝘵, 𝘚𝘌𝘙𝘦𝘴𝘕𝘦𝘵) and a nested decoder str…
  ☆43Updated 3 years ago
• moucheng2017 / EM-BPL-Semi-Seg
  [MICCAI 2022 Best Paper Finalist] Bayesian Pseudo Labels: Expectation Maximization for Robust and Efficient Semi Supervised Segmentation
  ☆40Updated 6 months ago
• mazurowski-lab / mri_foundation
  ☆66Updated 2 months ago
• KCL-BMEIS / VS_Seg
  Automatic Segmentation of Vestibular Schwannoma with MONAI (PyTorch)
  ☆50Updated 2 years ago
• cwmok / DIRAC
  This is the official Pytorch implementation of "Unsupervised Deformable Image Registration with Absent Correspondences in Pre-operative a…
  ☆45Updated 2 years ago
• neuronflow / BraTS-Toolkit
  Code to preprocess, segment, and fuse glioma MRI scans based on the BraTS Toolkit manuscript.
  ☆95Updated 2 months ago
• Sllambias / yucca
  ☆26Updated last week
• MIC-DKFZ / nnssl
  ☆118Updated 2 months ago
• SynthRAD2023 / preprocessing
  Preprocessing scripts: from dicom to aligned nitfy for SynthRAD2023 Grand Challenge
  ☆69Updated 2 years ago
• MECLabTUDA / Lifelong-nnUNet
  ☆155Updated last month
• hhaentze / MRSegmentator
  ☆144Updated 3 months ago
• MIC-DKFZ / MultiTalent
  Implemention of the Paper "MultiTalent: A Multi-Dataset Approach to Medical Image Segmentation"
  ☆61Updated 3 months ago
• PengchengShi1220 / cbDice
  [MICCAI 2024] Centerline Boundary Dice Loss for Vascular Segmentation
  ☆73Updated 3 months ago
• shangqigao / BayeSeg
  The official implementation of "Joint Modeling of Image and Label Statistics for Enhancing Model Generalizability of Medical Image Segmen…
  ☆40Updated 3 years ago
• ezequieldlrosa / isles22
  ☆42Updated last year
• fitushar / WeaklySupervised-3D-Classification-of-Chest-CT-using-Aggregated-MultiResolution-Segmentation-Feature
  This Repo contains the updated implementation of our paper "Weakly supervised 3D classification of chest CT using aggregated multi-resolu…
  ☆25Updated 5 years ago
• nadeemlab / CIR
  Clinically-Interpretable Radiomics [MICCAI'22, CMPB'21]
  ☆38Updated 2 years ago
• MungoMeng / Survival-DeepMTS
  DeepMTS: Deep Multi-Task Survival model for joint survival prediction and tumor segmentation
  ☆31Updated last year
• MIC-DKFZ / segmentation_failures_benchmark
  ☆15Updated 9 months ago
• fepegar / staple
  Python implementation of the STAPLE segmentation algorithm
  ☆31Updated last month