🍇 GRAPE is a Rust/Python Graph Representation Learning library for Predictions and Evaluations
☆637Feb 24, 2024Updated 2 years ago
Alternatives and similar repositories for grape
Users that are interested in grape are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- 🍇 Ensmallen is the Rust/Python high-performance graph processing submodule of the GRAPE library.☆41Sep 29, 2025Updated 9 months ago
- 🍇 Embiggen is the Python Graph Representation learning, Prediction and Evaluation submodule of the GRAPE library.☆44Jan 8, 2026Updated 6 months ago
- A fast, parallelized, memory efficient, and cache-optimized Python implementation of node2vec☆176Jul 13, 2026Updated last week
- Collection of tutorials to build RNA-KG v2.0 from scratch and for reproducing experiments such as "context-aware" KG pruning, clustering,…☆29Mar 16, 2026Updated 4 months ago
- 📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures☆75Jul 7, 2026Updated 2 weeks ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Data transformation framework for LinkML data models☆66Updated this week
- Schema and generated objects for biolink data model and upper ontology☆254Updated this week
- A package to transform all OBO ontologies into KGX TSV format and OBO json, and put the transformed graph in KGhub☆34Mar 19, 2024Updated 2 years ago
- Tools for working with KGCL☆20Nov 19, 2024Updated last year
- 🤖 A Python library for learning and evaluating knowledge graph embeddings☆2,018Jun 23, 2026Updated 3 weeks ago
- Semantic prefix map registry☆14Jul 2, 2026Updated 2 weeks ago
- A unifying framework for biomedical research knowledge graphs☆319Updated this week
- A collection of useful python functions for looking up information and working with the Biolink Model☆25Jul 10, 2026Updated last week
- 👁️🗨️ Scientists often do the same bad stuff. Automate giving deterministic feedback during peer review with determinstic (LLM-free)☆32May 9, 2025Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- 🗺️ Community curated and predicted equivalences and related mappings between named biological entities that are not available from prima…☆63Updated this week
- KGX is a Python library for exchanging Knowledge Graphs☆182Jul 10, 2026Updated last week
- Mondo Disease Ontology☆310Updated this week
- LLM-based ontological extraction tools, including SPIRES☆935Jun 22, 2026Updated 3 weeks ago
- A Rust implementation of HyperLogLog trying to be parsimonious with memory.☆34Jul 6, 2026Updated 2 weeks ago
- 📐 Results for the Ranking Metrics submission @ GLB 2022☆10Apr 6, 2022Updated 4 years ago
- NetworkX-based Python library for representing ontologies☆95Jul 12, 2023Updated 3 years ago
- First pass at a thin wrapper around the Monarch API and ChatGPT plugin☆12Mar 21, 2025Updated last year
- OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.☆102Jan 11, 2024Updated 2 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 📮 An integrative registry of biological databases, ontologies, and nomenclatures.☆145Updated this week
- ☆132Feb 2, 2023Updated 3 years ago
- Graph Data Science: an abstraction layer in Python for building knowledge graphs, integrated with popular graph libraries – atop Pandas, …☆688Jan 25, 2026Updated 5 months ago
- NP-KG: Knowledge Graph Framework for Natural Product-Drug Interactions☆20Jun 25, 2024Updated 2 years ago
- Fastest network node embeddings in the west☆557Dec 25, 2024Updated last year
- Ten quick tips to finish that manuscript that's 90% complete.☆13Mar 30, 2022Updated 4 years ago
- Medical action ontology☆64Jan 15, 2026Updated 6 months ago
- A foundation model for knowledge graph reasoning☆631Feb 3, 2025Updated last year
- Grounding of biomedical named entities with contextual disambiguation☆54Jun 29, 2026Updated 3 weeks ago
- Deploy open-source AI quickly and easily - Special Bonus Offer • AdRunpod Hub is built for open source. One-click deployment and autoscaling endpoints without provisioning your own infrastructure.
- Ontology Access Kit: A python library and command line application for working with ontologies☆183Updated this week
- A database of paths that represent the mechanism of action from a drug to a disease in an indication.☆76Jun 3, 2026Updated last month
- OpenBioLink is a resource and evaluation framework for evaluating link prediction models on heterogeneous biomedical graph data.☆161May 3, 2024Updated 2 years ago
- LLM-driven curation assist tool☆115Oct 20, 2025Updated 9 months ago
- 👜 Easily pick a place to store data for your Python code.☆42Jul 4, 2026Updated 2 weeks ago
- ☆20Jun 14, 2024Updated 2 years ago
- Enterprise graph machine learning framework for billion-scale graphs for ML scientists and data scientists.☆454Jun 30, 2026Updated 2 weeks ago